BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b02r (657 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK128348-1|BAC87394.1| 129|Homo sapiens protein ( Homo sapiens ... 37 0.055 U72788-1|AAD08631.1| 295|Homo sapiens SP2 metalloprotease protein. 31 2.7 AF019612-1|AAC51937.1| 519|Homo sapiens S2P protein. 31 2.7 >AK128348-1|BAC87394.1| 129|Homo sapiens protein ( Homo sapiens cDNA FLJ46490 fis, clone THYMU3027540. ). Length = 129 Score = 37.1 bits (82), Expect = 0.055 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 21 MYRYYMCGSNTYTYFNNSCIFTQN*IAYNIFYCYYSNHL 137 MY Y +C S+TY Y + C++ + Y C Y H+ Sbjct: 1 MYMYVLCISHTYVYITHICMYITHICVYQTHVCVYHTHM 39 >U72788-1|AAD08631.1| 295|Homo sapiens SP2 metalloprotease protein. Length = 295 Score = 31.5 bits (68), Expect = 2.7 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 5/38 (13%) Frame = -3 Query: 340 KTSSSSACISPLLD-----VNLSHSPPQ*TILYLSHPI 242 K+SSSS CI P L+ + + H PPQ +LY+ HP+ Sbjct: 155 KSSSSSFCIIPSLETHTRLIKVKH-PPQIDMLYVGHPL 191 >AF019612-1|AAC51937.1| 519|Homo sapiens S2P protein. Length = 519 Score = 31.5 bits (68), Expect = 2.7 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 5/38 (13%) Frame = -3 Query: 340 KTSSSSACISPLLD-----VNLSHSPPQ*TILYLSHPI 242 K+SSSS CI P L+ + + H PPQ +LY+ HP+ Sbjct: 379 KSSSSSFCIIPSLETHTRLIKVKH-PPQIDMLYVGHPL 415 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,837,842 Number of Sequences: 237096 Number of extensions: 1640641 Number of successful extensions: 2647 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2647 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7366354010 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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