BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b02f (645 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC062705-1|AAH62705.1| 98|Homo sapiens similar to DNA segment,... 75 2e-13 BC051802-1|AAH51802.1| 98|Homo sapiens similar to DNA segment,... 75 2e-13 BC095436-1|AAH95436.1| 108|Homo sapiens MGC71993 protein protein. 40 0.006 >BC062705-1|AAH62705.1| 98|Homo sapiens similar to DNA segment, Chr 11, Brigham & Womens Genetics 0434 expressed protein. Length = 98 Score = 75.4 bits (177), Expect = 2e-13 Identities = 38/90 (42%), Positives = 55/90 (61%) Frame = +2 Query: 98 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGY 277 CGPKL+ CG+VLS WG+I L ++G+F+ + + L+ED+PF EK+ E+ + Y Sbjct: 7 CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLY 62 Query: 278 TLNAQNCWIAALLYLITLVVSGHQFWLNNR 367 + NC+IAA LYL+ S Q LN R Sbjct: 63 EQVSYNCFIAAGLYLLLGGFSFCQVRLNKR 92 >BC051802-1|AAH51802.1| 98|Homo sapiens similar to DNA segment, Chr 11, Brigham & Womens Genetics 0434 expressed protein. Length = 98 Score = 75.4 bits (177), Expect = 2e-13 Identities = 38/90 (42%), Positives = 55/90 (61%) Frame = +2 Query: 98 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGY 277 CGPKL+ CG+VLS WG+I L ++G+F+ + + L+ED+PF EK+ E+ + Y Sbjct: 7 CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLY 62 Query: 278 TLNAQNCWIAALLYLITLVVSGHQFWLNNR 367 + NC+IAA LYL+ S Q LN R Sbjct: 63 EQVSYNCFIAAGLYLLLGGFSFCQVRLNKR 92 >BC095436-1|AAH95436.1| 108|Homo sapiens MGC71993 protein protein. Length = 108 Score = 40.3 bits (90), Expect = 0.006 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = +2 Query: 161 LMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVS 340 ++G+F+ + + L+ED+PF EK+ E+ + Y + NC+IAA LYL+ S Sbjct: 38 MLGIFFNVHSAVLIEDVPFTEKD----FENGPQNIYNLYEQVSYNCFIAAGLYLLLGGFS 93 Query: 341 GHQFWLNNR 367 Q LN R Sbjct: 94 FCQVRLNKR 102 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 90,719,116 Number of Sequences: 237096 Number of extensions: 1814182 Number of successful extensions: 6834 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6831 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7141427170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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