Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a21r
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.34 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.60 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.60 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.60 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.60 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.60 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.60 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.60 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.60 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.60 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   1.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   1.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 205 RSCNNYWRCQ 176
           +SCN YW+CQ
Sbjct: 168 KSCNRYWQCQ 177


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 79  PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 110


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 118 PREDPCLPDGLRSRGQPCSGVTSPNSSSTRLP 23
           PR  P L     S     SG+TSP S ST  P
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 208 HRSCNNYWRC 179
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 208 HRSCNNYWRC 179
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 269 SRASPPEAKDLRTRLKMRISPSAEPTD 349
           S  S  E KD+ T L    SP+ +P D
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDD 142


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 678 MKAFIFALALACV 640
           M A +F LALAC+
Sbjct: 1   MTAIVFLLALACL 13


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 678 MKAFIFALALACV 640
           M A +F LALAC+
Sbjct: 1   MTAIVFLLALACL 13


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 419 CICVVSATSAPDST*SWLF 363
           C C  S +  P ST  W F
Sbjct: 554 CYCYYSISIRPISTLGWFF 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,682
Number of Sequences: 336
Number of extensions: 2648
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)