Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a20f
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   3.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 286 LTIGLIVVVAVPL*PCIITTISQLLLKRAAVSFPVGKWSSVSVIEFL 146
           L  G++++ A+PL   I +  S LL  R     P G   + S + FL
Sbjct: 220 LLFGMVMMYALPLAVIIFSYASILLEIRRRTRNPYGDSVTRSSLAFL 266


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 286 LTIGLIVVVAVPL*PCIITTISQLLLKRAAVSFPVGKWSSVSVIEFL 146
           L  G++++ A+PL   I +  S LL  R     P G   + S + FL
Sbjct: 220 LLFGMVMMYALPLAVIIFSYASILLEIRRRTRNPYGDSVTRSSLAFL 266


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 194 YCCAL*Q*LGYCRNNTRSQWHCYDDD 271
           YCC       + R  T +  HCYD D
Sbjct: 82  YCCRE----SFLRERTITLTHCYDPD 103


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 378 QPSLPLNMLIN*MMTNPQR*RYNRHLL 298
           +P  P N++IN  + +  +  YN HL+
Sbjct: 267 RPDPPQNLVINESIIDLSQQTYNVHLM 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,219
Number of Sequences: 336
Number of extensions: 3354
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)