Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12a17r
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 76 7e-15
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 71 2e-13
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 56 5e-09
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 56 6e-09
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 50 6e-07
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 40 6e-04
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 30 0.49
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 30 0.49
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 30 0.49
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 28 1.5
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 28 2.0
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 28 2.0
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 27 3.4
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 27 3.4
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 4.5
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 26 6.0
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 26 6.0
AF016669-3|AAB66097.1| 275|Caenorhabditis elegans Hypothetical ... 26 6.0
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 26 7.9
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 26 7.9
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 75.8 bits (178), Expect = 7e-15
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = -2
Query: 264 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNGRKGI 91
F A V+ KT PS+DE L LY+L+KQ T+GD +P L AKW AW+ +KG+
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGDNTTDKPGMFDLKGKAKWSAWDEKKGL 64
Query: 90 SQDDAKKQYIENAEKLHSKY 31
++DDA+K Y+ E+L +KY
Sbjct: 65 AKDDAQKAYVALVEELIAKY 84
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = -2
Query: 282 MSLDEQFKQVADKVRNW-KTKP---SDDENLALYSLYKQATIGDVNIAQPS--GLVESAK 121
MSL E+F + ++ KT P S+D+ L YSL+KQA+IGDVN +P ++E K
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKK 60
Query: 120 WKAWNGRKGISQDDAKKQYIENAEKLHSKYA 28
W +W +G+SQD+AK++YI+ + K A
Sbjct: 61 WDSWKELEGVSQDEAKERYIKALNDMFDKIA 91
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 57.6 bits (133), Expect = 2e-09
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = -2
Query: 279 SLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWN 106
S F++ ++ K +P +D L LY L+KQAT GDV +P V AK+ AWN
Sbjct: 24 SAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQGKRPGMMDFVGRAKYDAWN 83
Query: 105 GRKGISQDDAKKQYIENAEKLHSKYA 28
KG +QD+A+ Y + L S+ A
Sbjct: 84 TLKGQTQDEARANYAKLVGGLISEEA 109
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 56.4 bits (130), Expect = 5e-09
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = -2
Query: 279 SLDEQFKQVADKV----RNWKTKPSDDENLALYSLYKQATIGDVNIAQP--SGLVESAKW 118
SLDEQF+ + +N K S ++ L +YSLYKQAT G + QP + + KW
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKW 63
Query: 117 KAWNGRKGISQDDAKKQYIENAEKL 43
AWN + + +AK QY+E KL
Sbjct: 64 NAWNQLGNMDEAEAKAQYVEKMLKL 88
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 56.0 bits (129), Expect = 6e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = -2
Query: 264 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVN----IAQPSG-LVESAKWKAWNGR 100
F+ A+++R K++P+D E L LY+LYKQA GD+ P+G V K+ AW +
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74
Query: 99 KGISQDDAKKQYIENAEKLHSKY 31
KG + + + Y+ AE++ KY
Sbjct: 75 KGANSEKCRADYVAIAEEMIKKY 97
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 49.6 bits (113), Expect = 6e-07
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = -2
Query: 225 KPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNGRKGISQDDAKKQYIEN 55
K S DE L Y+L+KQAT G ++ +PS + KW AWN ++ D+AK+ Y+++
Sbjct: 21 KTSTDEKLNFYALFKQATHGKCDLPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDS 79
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 14/66 (21%)
Frame = -2
Query: 198 LYSLYKQATIGDVNIAQPSGLV--------------ESAKWKAWNGRKGISQDDAKKQYI 61
++ LY+QA +GDVN+ + + + + KW AWN +G+++++A +QY+
Sbjct: 123 VWGLYQQAIVGDVNVPKLNYMEIDEGEKSWMWRWINGNEKWHAWNKCRGLTKEEASEQYV 182
Query: 60 ENAEKL 43
E +KL
Sbjct: 183 EAVQKL 188
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 263 SNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAP 123
+ ++P + T RP P T T+R P P TLP + RAP
Sbjct: 110 TTQAPTTIRTTRPPPAT--TIRTIPFVQTTPATFATLPPAPAVTRAP 154
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 158 TLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKM---RRNSTPNTHK 24
TLPS AV + H V K+SPK+ S+TS + NST N +K
Sbjct: 339 TLPSVAV---NTASSHEDVGKSSPKSSSESDTSTFDSRKHNSTANKYK 383
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 158 TLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKM---RRNSTPNTHK 24
TLPS AV + H V K+SPK+ S+TS + NST N +K
Sbjct: 345 TLPSVAV---NTASSHEDVGKSSPKSSSESDTSTFDSRKHNSTANKYK 389
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 EWSFSAFSMYCFLA-SSWEMPLRPFHAFHLALSTRPLGW 151
+WSF S C L W + + FH ++S + LGW
Sbjct: 182 QWSFYFHSATCLLIFCCWVLIYQDDPTFHKSVSVKELGW 220
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.0
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 230 RPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKMR 51
+P P + R T T+R ++TLP + R+P+ T KA+P T S TS
Sbjct: 473 KPPPTEIPDNRPTVVTTR---PLVTLPPAVIRSRSPAPPVSTTTKAAPTT---STTSAAP 526
Query: 50 RNSTP 36
+ TP
Sbjct: 527 YSPTP 531
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 97 FATVPCLPLGALHKTAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNL 246
+ +VP L LG + G N N LL QG +L GLG PNL
Sbjct: 7 YLSVPMLNLGQRRSSEGYLNAN----DLLSQGGGESLLDSAGLGTSQPNL 52
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -2
Query: 249 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 112
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -2
Query: 249 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 112
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 198 LYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKKQYIENAEKLHSKY 31
L +LY QAT+GD + G + W G +Q +A ++YI+ + +KY
Sbjct: 84 LNALYMQATVGDYD-----GNTALKCGQYWKKHSGKTQIEAIREYIKLTNQTLTKY 134
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -3
Query: 266 NSN-RSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 90
N+N R + T P+ T P T+ P V+ T +PA + + TVA A+
Sbjct: 180 NANCRKTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAA 239
Query: 89 PKTMPRSNTS 60
T + TS
Sbjct: 240 ATTTAAACTS 249
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -3
Query: 308 LLISKDNTKCLSTSNSNRSPIRL-GTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLW 132
+L + T +T + P + T P+ VT ++ T +++LP + T P P
Sbjct: 91 ILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPSTQLPTTVTTTPIPTTTT 150
Query: 131 RAPSGRHGTVAKASPKTMPR 72
R + K P T PR
Sbjct: 151 RKTTTTTLRPTKPRPMTKPR 170
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 54 HFRCIASWHRLGRCLCDRSMPSTWR 128
H+ C A+W R G CL ++ MP R
Sbjct: 758 HYDC-AAWARRGECLKNKWMPENCR 781
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 112 MERSQRHLPRRCQEAIHRKCGETPLQIRI 26
M+RS RH RR E H++ +P I +
Sbjct: 349 MDRSTRHATRRVDEFTHKRRSPSPEVINV 377
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 269 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSR 177
+N NR + G S + TL+CT C+ R
Sbjct: 645 ANDNRCAVCAGERHSSSMCYSTLKCTYCSGR 675
>AF016669-3|AAB66097.1| 275|Caenorhabditis elegans Hypothetical
protein K10G6.2 protein.
Length = 275
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 1 IYLILSNNLCVFGVEFLRIFDVLLLGIVLGDAFATVPCLPLGALHK 138
I L+LS L +F V+F++ D L VLG +PL L K
Sbjct: 2 IRLVLSIGLLIFNVDFVKSEDPTLSATVLGGDLEPFD-IPLEELEK 46
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 139 TAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNLIGDLFELLV 273
T+G N+T G++L +K+L+ T +G + +L+ LL+
Sbjct: 2039 TSGNTYFNMTVGNMLKGNEGKKLLLDTTVGYKMDDLLTSYISLLI 2083
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 25.8 bits (54), Expect = 7.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 89 PKTMPRSNTSKMRRNSTPNTH 27
PK P+ +T K++R ++P T+
Sbjct: 184 PKKTPKQSTKKLKRTTSPETN 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,932,886
Number of Sequences: 27780
Number of extensions: 193899
Number of successful extensions: 723
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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