Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a14f
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   3e-04
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.58 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.77 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   5.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.4  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 183 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 326
           +RIVGG+       P +AG+      G   ICGA++++    +TAAHC
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHC 204


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 261  HSSVRSQVQQDGGEHQRWRQNHPQSWYRRSQR 166
            HSS ++Q QQ   + Q+ +Q  PQ   ++ Q+
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQ 1526



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -1

Query: 404 PGAS---GEDVSCAKSEGELTSLGSPG 333
           PG S   GE  S A ++G  T+  SPG
Sbjct: 893 PGCSSKNGEPTSAAFAQGFATAASSPG 919


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 233 CWTCDRTDEWQNFH 274
           CW CD+ +E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 494 LHQQHPAHQPSQWKQQ 541
           +H QHP  QP Q + Q
Sbjct: 172 MHTQHPHMQPQQGQHQ 187


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +2

Query: 233 CWTCDRTDEWQ 265
           CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 324 CWRTRRAQARQFTLALGTANI 386
           CW TR+    Q    +GT+N+
Sbjct: 459 CWDTRKEYIPQNLGVIGTSNL 479


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 39  WLLPVYRFPRVE 4
           WL P+Y+ P+V+
Sbjct: 70  WLSPIYKSPQVD 81


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 435 SYNMDTLHNDVAIINHNHVGFTNN 506
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 435 SYNMDTLHNDVAIINHNHVGFTNN 506
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 355  SSPSLLAQLTSSPEAPGSPPPMSR 426
            S PS    + ++ EAP  PP   R
Sbjct: 961  SDPSDTVTIITAEEAPSGPPTSIR 984


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +2

Query: 194 GWFCRQRW 217
           GW C  RW
Sbjct: 377 GWICEHRW 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,180
Number of Sequences: 438
Number of extensions: 2624
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)