Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a11f
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.5  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   4.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   6.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   7.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.9  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 42  SRSISCSGGGTALQTSNGSTRA 107
           S S SC+GG   +  S+G++RA
Sbjct: 92  SNSASCTGGAAPILESDGASRA 113


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 82  KLRTDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEML 192
           +LR  LPE  Q+      D+F+ YLDA LA  + EM+
Sbjct: 138 RLRAFLPEMVQMI-----DQFQAYLDAKLA-AEGEMI 168


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 448 ANWLRGNSAFGQLTCSSHAHHDAQQTNTRCFNNH 549
           A WLRGNS     + SS + + +   N+     H
Sbjct: 30  AAWLRGNSGSPLSSISSSSRNSSSCNNSSSSGTH 63


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 316 QIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNN 438
           +IR +R E+  +    S  +  + N +SN    T+S  NNN
Sbjct: 181 RIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNN 221


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 316 QIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNN 438
           +IR +R E+  +    S  +  + N +SN    T+S  NNN
Sbjct: 181 RIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNN 221


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 316 QIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNN 438
           +IR +R E+  +    S  +  + N +SN    T+S  NNN
Sbjct: 133 RIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNN 173


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +2

Query: 98   YQSQDNWLLF----LTKMSLKTTSMPISLFNNLKCSPIKPGMISEAVAHSESTVI 250
            Y  +D++ L+      K +++ +   +S  +N   S  KPG  +  +  S+ TV+
Sbjct: 1337 YDEEDDYYLYDGSEKPKNAIEPSQEAVSGTDNANDSGDKPGSRNRTITQSQDTVV 1391


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,101
Number of Sequences: 2352
Number of extensions: 13270
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)