Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a06r
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    27   0.70 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.5  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -2

Query: 533 ITEWSGTESRRKQPLKSPIDLVVIQHTVSNDCFTDEECLLSVNSL 399
           +T W  TE RR    +  ++L  ++H   N  +      LS   L
Sbjct: 251 VTGWGETEDRRPSDTQKHVELPGLEHEACNSVYAVANVTLSDKQL 295


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 338 GNGKIYEGAGWNHIGAHTLHYNNIS 264
           G+G++ EG G  H G H +    +S
Sbjct: 213 GHGRVGEGEGGEHGGEHVVERYPVS 237


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 440  CFTDEECLLSVNSLRQHHML 381
            C    ECL+ + +LR H+ +
Sbjct: 1664 CIFSSECLMKIFALRYHYFI 1683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,516
Number of Sequences: 2352
Number of extensions: 15385
Number of successful extensions: 81
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)