BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12a05r (730 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 43 3e-06 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 28 0.10 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 27 0.24 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.55 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.3 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.7 AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.7 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.2 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.2 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.2 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.2 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.9 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.9 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.9 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.9 AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.8 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.0 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.0 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.0 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.0 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.0 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.0 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.0 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 42.7 bits (96), Expect = 3e-06 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 13/231 (5%) Frame = -2 Query: 687 PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTR 508 P +AG+ G ICGA++++ +TAAHC N + + G + +S T Sbjct: 173 PMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIIDEN--TTKLAIVVGEHD-WSSKTE 227 Query: 507 VTTSSVH------LHGSYNMNNLN----NDVAII-NHNHVGFNNNIQRINLASXXXXXXX 361 + +H +H Y++ + ND+A++ + F + + L Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSF 287 Query: 360 XXXXXXXXGRTSDAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRST 181 G + +G + ++ +L ++T C + YGN I+ + +C + A G+ Sbjct: 288 AGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYGN--IMVNAMC-AYAKGKDA 344 Query: 180 CXXXXXXXXXXXXXXGRQL--IGITSFGSDRGCQRGYPAGFARVTSFNSWI 34 C ++L IGI S+G++ G YP G +V S+ WI Sbjct: 345 CQMDSGGPVLWQNPRTKRLVNIGIISWGAECG---KYPNGNTKVGSYIDWI 392 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 27.9 bits (59), Expect = 0.10 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = -2 Query: 507 VTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNN 409 ++ ++H + +YN NN NN+ N+N+ +NN Sbjct: 318 LSNKTIHNNNNYNNNNYNNNYN--NYNNNNYNN 348 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 26.6 bits (56), Expect = 0.24 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 507 VTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNN 409 ++ ++H + +YN NN NN N+N+ +NN Sbjct: 85 LSNKTIHNNNNYNNNNYNN----YNYNNNNYNN 113 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 25.4 bits (53), Expect = 0.55 Identities = 10/38 (26%), Positives = 23/38 (60%) Frame = -2 Query: 507 VTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRI 394 ++ ++H + +Y N NN+ N+N+ +NNN +++ Sbjct: 318 LSNKTIHNNNNYKYNYNNNNYNNNNYNN-NYNNNCKKL 354 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -2 Query: 471 NMNNLNNDVAIINHNHVGFNNNIQRI 394 N NN NN+ N+ + +NNN +++ Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNYKKL 351 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 23.8 bits (49), Expect = 1.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 517 AGEDVSCTKSEGELTSLGVPG 579 AG D+S + GE LGVPG Sbjct: 184 AGGDISSFITNGEWDLLGVPG 204 >AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate receptor 1 protein. Length = 843 Score = 23.8 bits (49), Expect = 1.7 Identities = 6/14 (42%), Positives = 9/14 (64%) Frame = -1 Query: 679 CWTCDRTHEWQNFH 638 CW CD+ E++ H Sbjct: 467 CWVCDQCEEYEYVH 480 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 352 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 23.4 bits (48), Expect = 2.2 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 352 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.0 bits (47), Expect = 2.9 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFN-NNIQRI 394 ++ +++ L +YN NN N+ N+N + +N N I++I Sbjct: 80 KIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.0 bits (47), Expect = 2.9 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = -2 Query: 507 VTTSSVHLHGSYNMNNLNN 451 ++ ++H + +YN NN NN Sbjct: 85 LSNKTIHNNNNYNNNNYNN 103 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.6 bits (46), Expect = 3.9 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ +++N Sbjct: 318 LSNNYNYNNYNNNYKPLHYN 337 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 22.6 bits (46), Expect = 3.9 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -2 Query: 501 TSSVHLHGSYNMNNLNNDVAIINHNHVGFNNN 406 T++ + + + N NN NN+ A N N G +NN Sbjct: 235 TNASNNNNNNNNNNNNNNGANDNGNGNGASNN 266 >AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate receptor protein. Length = 933 Score = 21.8 bits (44), Expect = 6.8 Identities = 5/11 (45%), Positives = 8/11 (72%) Frame = -1 Query: 679 CWTCDRTHEWQ 647 CW CD+ E++ Sbjct: 557 CWVCDQCEEYE 567 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 85 LSNNYNYNNYNNNYKPLYYN 104 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 85 LSNNYNYNNYNNNYKPLYYN 104 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 85 LSNNYNYNNYNNNYKPLYYN 104 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 85 LSNNYNYNNYNNNYKPLYYN 104 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.4 bits (43), Expect = 9.0 Identities = 11/29 (37%), Positives = 13/29 (44%) Frame = +2 Query: 629 APQMEVLPFVSAITSPARWGLSTSVGGRT 715 APQ + FV T W +GGRT Sbjct: 320 APQNLTVNFVDQSTVFLSWNAPHMLGGRT 348 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 318 LSNNYNYNNYNNNYKPLYYN 337 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 318 LSNNYNYNNYNNNYKPLYYN 337 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 318 LSNNYNYNNYNNNYKPLYYN 337 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 318 LSNNYNYNNYNNNYKPLYYN 337 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 Query: 486 LHGSYNMNNLNNDVAIINHN 427 L +YN NN NN+ + +N Sbjct: 307 LSNNYNYNNYNNNYKPLYYN 326 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.4 bits (43), Expect = 9.0 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -2 Query: 120 GITSFGSDRGCQRG 79 GITS GSD G G Sbjct: 1065 GITSSGSDSGSSNG 1078 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.315 0.133 0.398 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 150,863 Number of Sequences: 438 Number of extensions: 2832 Number of successful extensions: 39 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 37 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22657590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits)
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