Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a03r
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   5.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   5.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   5.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.3  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 463 ITLILDNLSEVLPETHKRSSVHL 531
           +TL+  NLS+V P T K   + L
Sbjct: 316 VTLLQVNLSQVDPATRKEIDIFL 338


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 463 ITLILDNLSEVLPETHKRSSVHL 531
           +TL+  NLS+V P T K   + L
Sbjct: 316 VTLLQVNLSQVDPATRKEIDIFL 338


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 463 ITLILDNLSEVLPETHKRSSVHL 531
           +TL+  NLS+V P T K   + L
Sbjct: 316 VTLLQVNLSQVDPATRKEIDIFL 338


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 113 STVLSSCYVAMVRLHKK 63
           ST+L +C++  VR++ K
Sbjct: 52  STILGTCWIIYVRIYCK 68


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 158 ALASTWSPLQDLSAPSTVLSSCYVAMVRLHK 66
           A+  TW+  +      T+L + +V +++LHK
Sbjct: 62  AIHFTWASARVGYTIVTILGATFVTVLQLHK 92


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 158 ALASTWSPLQDLSAPSTVLSSCYVAMVRLHK 66
           A+  TW+  +      T+L + +V +++LHK
Sbjct: 62  AIHFTWASARVGYTIVTILGATFVTVLQLHK 92


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 158 ALASTWSPLQDLSAPSTVLSSCYVAMVRLHK 66
           A+  TW+  +      T+L + +V +++LHK
Sbjct: 62  AIHFTWASARVGYTIVTILGATFVTVLQLHK 92


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 8   SLICLSLSFLRFHILE 55
           SL+  ++  LRFH+LE
Sbjct: 145 SLMVQAIQVLRFHLLE 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,346
Number of Sequences: 336
Number of extensions: 3347
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)