Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a03f
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   8.4  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.4  
AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.4  
AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.4  
AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.4  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 417 TGKRSVGRPPTRWTDDLIKSAGSRWMQVAMDRSHWKS 307
           T KR V   P R  DDL     + W ++  DRS  ++
Sbjct: 204 TLKRHVKNQPARSADDLWTRCEAMWKRI--DRSECRN 238


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 432 EWRPRTGKRSVGRPPTRWTDDLIKSAGSRWMQVAMDRSHWKSAKL 298
           +WR   GK+S  R   +  +D+I+           D+S  K A++
Sbjct: 247 QWRKEGGKQSKSRYFFKSVEDVIEKGKKTATYAPFDKSSSKLAQV 291


>AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -3

Query: 460 GRSMGQKDPGVATTYWQAQCGTATY*MDRRPNKKRWV 350
           G S  Q+DP VA     +  G   +  D  PN   WV
Sbjct: 192 GMSSCQRDPVVAQFAEYSSQGKVLHKEDLTPNPLSWV 228


>AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -3

Query: 460 GRSMGQKDPGVATTYWQAQCGTATY*MDRRPNKKRWV 350
           G S  Q+DP VA     +  G   +  D  PN   WV
Sbjct: 192 GMSSCQRDPVVAQFAEYSSQGKVLHKEDLTPNPLSWV 228


>AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -3

Query: 460 GRSMGQKDPGVATTYWQAQCGTATY*MDRRPNKKRWV 350
           G S  Q+DP VA     +  G   +  D  PN   WV
Sbjct: 192 GMSSCQRDPVVAQFAEYSSQGKVLHKEDLTPNPLSWV 228


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 151 GLRWDNVHGMHHLR 192
           GLRW + H  H LR
Sbjct: 3   GLRWTSSHRAHELR 16


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,199
Number of Sequences: 2352
Number of extensions: 13729
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)