Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a02r
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.9  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 172 FLLNAFHRKCNKMVLGRHQ 116
           FL N FH     M+L R+Q
Sbjct: 144 FLYNCFHSTLLLMILSRYQ 162


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 409 RERPNIRVMVLWRFFIKT 462
           RE+P++++ + +RF I T
Sbjct: 485 REKPDVKIFLPFRFHIYT 502


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 302 ANVTRLVTSRINTFQSNRQ 358
           A + +L++  INTF SN++
Sbjct: 17  AEIAQLMSLIINTFYSNKE 35


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 364 NYLQAFNEHRNIMRQRERPNIRVMVLWRFFIKTMSGII 477
           NY   F+  +  + Q++  N R  V   FF+  + G++
Sbjct: 352 NYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,526
Number of Sequences: 336
Number of extensions: 2273
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)