Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a02r
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92910-1|CAB07442.1|  348|Homo sapiens HFE protein.                    31   3.8  
Y09801-1|CAA70934.1|  348|Homo sapiens HFE protein.                    31   3.8  
U91328-2|AAB82083.1|  348|Homo sapiens hereditary hemochromatosi...    31   3.8  
U60319-1|AAC51823.1|  348|Homo sapiens haemochromatosis protein ...    31   3.8  
BC117203-1|AAI17204.1|  348|Homo sapiens hemochromatosis protein.      31   3.8  
BC117201-1|AAI17202.1|  348|Homo sapiens hemochromatosis protein.      31   3.8  
AY205604-1|AAO47091.1|  268|Homo sapiens hemochromatosis protein.      31   3.8  
AJ249336-1|CAC67793.1|  260|Homo sapiens hemochromatosis protein...    31   3.8  
AJ249335-1|CAC67792.1|  325|Homo sapiens hemochromatosis protein...    31   3.8  
AF144241-1|AAG29576.1|  116|Homo sapiens hemochromatosis splice ...    31   3.8  
AF144240-1|AAG29575.1|  165|Homo sapiens hemochromatosis splice ...    31   3.8  
AF115265-1|AAG29572.1|  348|Homo sapiens hemochromatosis termina...    31   3.8  
AF079408-1|AAC62647.1|  260|Homo sapiens hemochromatosis splice ...    31   3.8  

>Z92910-1|CAB07442.1|  348|Homo sapiens HFE protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>Y09801-1|CAA70934.1|  348|Homo sapiens HFE protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>U91328-2|AAB82083.1|  348|Homo sapiens hereditary hemochromatosis
           protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>U60319-1|AAC51823.1|  348|Homo sapiens haemochromatosis protein
           protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>BC117203-1|AAI17204.1|  348|Homo sapiens hemochromatosis protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>BC117201-1|AAI17202.1|  348|Homo sapiens hemochromatosis protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>AY205604-1|AAO47091.1|  268|Homo sapiens hemochromatosis protein.
          Length = 268

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 73  LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 132


>AJ249336-1|CAC67793.1|  260|Homo sapiens hemochromatosis protein
           protein.
          Length = 260

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 65  LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 124


>AJ249335-1|CAC67792.1|  325|Homo sapiens hemochromatosis protein
           protein.
          Length = 325

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 130 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 189


>AF144241-1|AAG29576.1|  116|Homo sapiens hemochromatosis splice
           variant 861-2305del protein.
          Length = 116

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 43  LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 102


>AF144240-1|AAG29575.1|  165|Homo sapiens hemochromatosis splice
           variant 1043-2283del,intron6ins protein.
          Length = 165

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 42  LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 101


>AF115265-1|AAG29572.1|  348|Homo sapiens hemochromatosis
           termination variant terE6 protein.
          Length = 348

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 153 LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 212


>AF079408-1|AAC62647.1|  260|Homo sapiens hemochromatosis splice
           variant delE2 protein.
          Length = 260

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 253 IDWATPTECLWPTSLRG*RHAVSDVTNKYLSKQQATANYLQAFNEHRNIMRQRERPNIRV 432
           +DW       WPT L   RH +    N+   ++   A   Q     R ++ Q+  P ++V
Sbjct: 65  LDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKV 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,393,998
Number of Sequences: 237096
Number of extensions: 1289426
Number of successful extensions: 1643
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)