Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12a02f
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p pro...   323   1e-88
AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar pro...   323   1e-88
AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA...   323   1e-88
AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....   307   7e-84
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...   307   7e-84
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...   108   7e-24
AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...   107   9e-24
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    29   5.0  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    29   5.0  

>AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p
           protein.
          Length = 246

 Score =  323 bits (794), Expect = 1e-88
 Identities = 161/175 (92%), Positives = 169/175 (96%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 262
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 263 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 442
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 443 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
           LAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRV AIEHV
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHV 175


>AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar
           proton-translocatingATPase subunit D protein.
          Length = 246

 Score =  323 bits (794), Expect = 1e-88
 Identities = 161/175 (92%), Positives = 169/175 (96%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 262
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 263 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 442
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 443 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
           LAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRV AIEHV
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHV 175


>AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA
           protein.
          Length = 246

 Score =  323 bits (794), Expect = 1e-88
 Identities = 161/175 (92%), Positives = 169/175 (96%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 262
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 263 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 442
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 443 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
           LAGLARGGQQLAKLKKN+QSAVKLLVELASLQTSFVTLDEVIKITNRRV AIEHV
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHV 175


>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score =  307 bits (754), Expect = 7e-84
 Identities = 151/175 (86%), Positives = 163/175 (93%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 262
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 263 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 442
           VMKEAAFSLAE KFTTGD NQ+VLQNVTKAQIKIR+KKDNVAGVTLPIFE Y DG DTYE
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYE 120

Query: 443 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
           LAGLARGGQQLAKLKKN+QSAV+LLV+LASLQTSFVTLD+VIK+TNRRV AIEHV
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHV 175


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score =  307 bits (754), Expect = 7e-84
 Identities = 151/175 (86%), Positives = 163/175 (93%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 262
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 263 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 442
           VMKEAAFSLAE KFTTGD NQ+VLQNVTKAQIKIR+KKDNVAGVTLPIFE Y DG DTYE
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYE 120

Query: 443 LAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
           LAGLARGGQQLAKLKKN+QSAV+LLV+LASLQTSFVTLD+VIK+TNRRV AIEHV
Sbjct: 121 LAGLARGGQQLAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHV 175


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score =  108 bits (259), Expect = 7e-24
 Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 259
           M+ +D L IFPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 260 EVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 439
           E M+ A FS+A+A     DF   ++     A + +R  +  + GV L   E    G   +
Sbjct: 60  EAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAF 119

Query: 440 ELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
            LAGL+ GG Q+++++ ++  A+K LVE ASL+     L+     TN RV A+EHV
Sbjct: 120 PLAGLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHV 175


>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score =  107 bits (258), Expect = 9e-24
 Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
 Frame = +2

Query: 83  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 259
           M+ +D L +FPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPVFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 260 EVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 439
           E M+ A FS+A+A     DF   ++     A + +R  +  + GV L   E    G   +
Sbjct: 60  EAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAF 119

Query: 440 ELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVTAIEHV 607
            LAGL+ GG Q+++++ ++  A+K LVE ASL+     L+     TN RV A+EHV
Sbjct: 120 PLAGLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHV 175


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 313 SSCELSFSQRESSFFHHFTHKG 248
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 313 SSCELSFSQRESSFFHHFTHKG 248
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,684,141
Number of Sequences: 53049
Number of extensions: 559685
Number of successful extensions: 1387
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)