Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p24r
         (378 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical pr...    27   3.4  
Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical pr...    27   5.9  
Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical pr...    27   5.9  
AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical ...    27   5.9  
Z70306-2|CAA94323.2|  785|Caenorhabditis elegans Hypothetical pr...    26   7.8  
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    26   7.8  
AF000417-1|AAC39118.1|  785|Caenorhabditis elegans high-affinity...    26   7.8  

>Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical
           protein C08B6.7 protein.
          Length = 750

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 370 CYPTRCXNAPGYFC*XARMGNYRSRRQCI 284
           C  T C    GY C   R G Y+ +R CI
Sbjct: 660 CVVTACQE--GYICTWGRPGRYQPKRDCI 686


>Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 130 VPLAFFQNALVGXVSFGKSNANDXSPVVLTSISS 29
           + L F  N      +   SNAND  PV L SISS
Sbjct: 281 IALRFAFNVSAYADAHNASNANDGRPVTLQSISS 314


>Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 130 VPLAFFQNALVGXVSFGKSNANDXSPVVLTSISS 29
           + L F  N      +   SNAND  PV L SISS
Sbjct: 281 IALRFAFNVSAYADAHNASNANDGRPVTLQSISS 314


>AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical
           protein F35B3.4 protein.
          Length = 227

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 117 KARGTQVXYCRSRGHQPGPNRXIICYQSRRDHDPCTVPCSFLCWSQ 254
           KARG++    +S        + + C Q R   D C   CSF  +++
Sbjct: 55  KARGSKTLSIKSEKTMSPDEKFMRCCQERNLPDACLSKCSFRTYTK 100


>Z70306-2|CAA94323.2|  785|Caenorhabditis elegans Hypothetical
           protein C06G8.2 protein.
          Length = 785

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 60  MSLALLFPKDTMPTSAFWKKARGTQ 134
           M L L+ P D +P++  W++  GT+
Sbjct: 520 MGLNLIVPCDKIPSNVTWEQCNGTE 544


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -1

Query: 318 GWGTTVQGXSVSXGXLHKLELIVTNKENCREQYKGHDRVVTDNKLXAG 175
           GWG+T++G S+S   L ++ + + +   C        R+   + L AG
Sbjct: 181 GWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG 228


>AF000417-1|AAC39118.1|  785|Caenorhabditis elegans high-affinity
           peptide transporter protein.
          Length = 785

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 60  MSLALLFPKDTMPTSAFWKKARGTQ 134
           M L L+ P D +P++  W++  GT+
Sbjct: 520 MGLNLIVPCDKIPSNVTWEQCNGTE 544


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,897,084
Number of Sequences: 27780
Number of extensions: 134340
Number of successful extensions: 275
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)