Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p22r
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -3

Query: 452 WLIIRAGRRHSTGCRDVNSGSRYQCWAVHRILASTHRFGSK 330
           +L++ +G  H       +    YQC   HR+   T    +K
Sbjct: 177 YLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATK 217


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 644 HVCWHFRHQSEESPVLTAMCNYHC 715
           H+ +H R+ +   P     C+Y C
Sbjct: 245 HLEYHLRNHAGSKPFQCNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 644 HVCWHFRHQSEESPVLTAMCNYHC 715
           H+ +H R+ +   P     C+Y C
Sbjct: 3   HLEYHLRNHAGSKPFQCNKCDYTC 26


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 166 FILFCTSKRQPWNEPKES 113
           F  FC    + WN P+E+
Sbjct: 429 FFTFCNVLMEMWNIPREN 446


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +1

Query: 40  FYFKYNLCLFAFQLPCFLVPSIQYQTPLVHSKVAFLRYKTI 162
           F+    L  F F L   ++  I     L+H  VA    KT+
Sbjct: 237 FFLGSILIFFIFPLAILIIVYILIAKTLMHHPVAMTGTKTV 277


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 404 VNSGSRYQCWAVHRILASTHRFGSKFQRITN 312
           V S   Y+ W  + +  +TH  G K   +T+
Sbjct: 156 VYSRHPYESWPFNTMSGATHHGGIKSDSVTS 186


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 223 EWRKVFFVASGVYFFGNLFFILFCTSK 143
           EW+   FV +    FG     LFC  K
Sbjct: 62  EWKSFRFVYAVYNIFGAFVMGLFCILK 88


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 199 ASGVYFFGNLFFILFCTSKRQPWN 128
           A  V F  N+  I+    K+Q WN
Sbjct: 353 ADTVLFILNISTIIITARKKQQWN 376


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 502 RKLFNTIGHW 473
           R +++T+GHW
Sbjct: 454 RVIYSTVGHW 463


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 396 TVNITTASTVSPAGAYDKPMSAI 464
           TVN +TA  V     YD+ +S +
Sbjct: 277 TVNKSTAHAVGVGNIYDRVLSEL 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,605
Number of Sequences: 336
Number of extensions: 4046
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)