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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p22r
         (715 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0557 + 4394754-4396040                                           88   6e-18
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106           85   7e-17
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821...    77   2e-14
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133...    72   5e-13
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991...    57   1e-08
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069...    39   0.003
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    36   0.042
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777...    31   0.69 
04_04_0387 + 24869594-24871480                                         29   3.7  
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863...    28   8.5  

>11_01_0557 + 4394754-4396040
          Length = 428

 Score = 88.2 bits (209), Expect = 6e-18
 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
 Frame = -1

Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536
           A++V +   ++  + LM  +PTY                 LPYL+M++ S   G + D +
Sbjct: 229 AIVVNNFTFHYALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHL 288

Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY--APAGDXXXXXXXXXXXVGINAGQYTG 362
           I  K L+V+ TRKL NT+G    AIAL+ L     P+G            +G  A    G
Sbjct: 289 ITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSG----AIFCSSVSLGFLALGRAG 344

Query: 361 YLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN-------DETQPSEWRKVFF 203
           + + H+D+AP F+  +MGI+N    +  I+   + G I+        D T    WR VFF
Sbjct: 345 FAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFF 404

Query: 202 VASGVYFFGNLFFILFCTSKR 140
           V   +  F +  F++F T ++
Sbjct: 405 VPGYLCIFSSFIFLIFSTGEK 425


>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
          Length = 427

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
 Frame = -1

Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536
           A++V +   ++  + LM  +PTY                 LPY +M+I S   G + D +
Sbjct: 228 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQDMGSSKMLPYFNMFIFSNIGGVVADHL 287

Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY--APAGDXXXXXXXXXXXVGINAGQYTG 362
           I  + L+++ TRKL NTIG    A+AL+ L     P+G            +G  A    G
Sbjct: 288 ITRRILSITKTRKLLNTIGFVVSAVALMALPLFRTPSG----TVLCSSISLGFLALGRAG 343

Query: 361 YLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN-------DETQPSEWRKVFF 203
           + + H+D+AP F+  +MG++N    +  I+   + G I+        D T    W+ VFF
Sbjct: 344 FAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFF 403

Query: 202 VASGVYFFGNLFFILFCTSKR 140
           V   +  F ++ F++F T ++
Sbjct: 404 VPGYLCIFSSIIFLIFSTGEK 424


>01_06_1363 -
           36681605-36681789,36681875-36681908,36682017-36682154,
           36682578-36682724,36682821-36682865,36683043-36683331,
           36683443-36683669,36684109-36684528
          Length = 494

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 48/181 (26%), Positives = 91/181 (50%)
 Frame = -1

Query: 682 GFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVIIRNKWLNVSNT 503
           G+F +++ MP Y                 LP++ M +L +  G ++D +I+N   +++ T
Sbjct: 313 GYFVILSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNG-TSITLT 371

Query: 502 RKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYLLVHIDLAPNFS 323
           RK+  TIG  GP +AL+GL+ A +             VG+ +  ++G+L+   ++AP ++
Sbjct: 372 RKIMQTIGFVGPGVALLGLNAAKS--PVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYA 429

Query: 322 ASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFILFCTSK 143
             L G++N      +I+  +  GF V+   +   +R    + S +YF   LF+ +F T +
Sbjct: 430 GVLHGMSNTAGTFAAILGTVGAGFFVD---RMGSFRGFLILTSLLYFSSTLFWDIFATGE 486

Query: 142 R 140
           R
Sbjct: 487 R 487


>05_05_0059 +
           22011168-22011662,22012668-22012894,22013029-22013377,
           22013464-22013508,22013589-22013735,22013851-22013988,
           22014126-22014159,22014258-22014430
          Length = 535

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 44/189 (23%), Positives = 88/189 (46%)
 Frame = -1

Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536
           A+IVA+   NWG+F L++ MP Y                 +P+  M +  +  G   D +
Sbjct: 347 AIIVANVVNNWGYFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFL 406

Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYL 356
           I++ + +V+  RK+  +IG  GP ++L+ L +A               + +++    GY 
Sbjct: 407 IKSGF-SVALVRKIMQSIGFIGPGVSLLCLRFAQT--PSVAAVLMTIALSLSSFSQAGYF 463

Query: 355 LVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFG 176
               D+AP ++ SL G+TN +  + +I++ +  G+ V        ++    + + +YF  
Sbjct: 464 CNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQ---WLGSFQAFLTLTAVLYFSA 520

Query: 175 NLFFILFCT 149
            +F+  + T
Sbjct: 521 TVFYNTYAT 529


>01_01_1227 +
           9912646-9913056,9913306-9913413,9913517-9913672,
           9914110-9914325,9914436-9914645,9914722-9914859,
           9915076-9915177,9915508-9915603
          Length = 478

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 50/92 (54%)
 Frame = -1

Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536
           A+IV+H   NWG F L+T MPTY                 LP+L+M + +   G++ D +
Sbjct: 342 ALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTL 401

Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY 440
           + ++ L+V+  RK+  +IG  GPA  L  LS+
Sbjct: 402 V-SRGLSVTTVRKIMQSIGFLGPAFFLTQLSH 432


>09_06_0242 -
           21806370-21806483,21806574-21806660,21806865-21806917,
           21806999-21807140,21807406-21807501,21808617-21808785,
           21808859-21808939,21809032-21809106,21810322-21810387,
           21811013-21811158,21811898-21812344
          Length = 491

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
 Frame = -1

Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXX 413
           P  SM I S    +  ++I  +  ++ +  RK+  TI    PA  ++  S          
Sbjct: 334 PLGSMIITSIAAPFADNLI--SNGVDTTKVRKICQTIAFLSPATFMMLSSVDLGVPPWEI 391

Query: 412 XXXXXXXVGINAGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDET 233
                  + +++   +G    H D++  +++ L+GITN +  +  I+   + G+++ D T
Sbjct: 392 VAFLTSGLALSSFALSGLYCTHQDISREYASILLGITNTVGAVPGIVGVALTGYLL-DTT 450

Query: 232 QPSEWRKVFFVASGVYFF--GNLFFILFCTSKRQPW--NEPKES 113
               W  +   A  ++F+  G   ++ F +S+ Q +  +EP+ S
Sbjct: 451 H--SW-SISLFAPSIFFYLTGTAVWLAFASSEPQEFSKSEPESS 491


>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = -1

Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLS 443
           P+L+M I +   G++ D ++  + ++++N RK+  +IG  GPA+ L  LS
Sbjct: 375 PWLTMAIFANIGGWIADTLV-GRGVSITNVRKIMQSIGFLGPALFLTLLS 423


>07_03_1115 -
           24076506-24076677,24077169-24077266,24077622-24077743,
           24079059-24079235,24079809-24079897,24079919-24079965,
           24080423-24080519,24080600-24080682,24080716-24080796,
           24081043-24081199,24081323-24081750,24081985-24082014,
           24083180-24083300,24083432-24083697
          Length = 655

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 37  SFYFKYNLCLFAFQLPCFLVPSIQYQTPLVH 129
           S +F+YNL LF      FL   IQ++ P+V+
Sbjct: 429 SIFFRYNLSLFLHHYGNFLAALIQFRNPIVY 459


>04_04_0387 + 24869594-24871480
          Length = 628

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 212 FTPFRWLGLVVNDEAANQRSDDRNNIGQEVGD 307
           + P+ W G+VV      + SDDR ++  EV D
Sbjct: 195 YGPYSWRGIVVGPPIRGRFSDDRVSLMSEVSD 226


>01_06_1742 -
           39585879-39585994,39586089-39586238,39586288-39586375,
           39586479-39586640,39586753-39586877,39586992-39587030,
           39587290-39587476,39587643-39587713,39589371-39589564,
           39589656-39589767,39589899-39590082,39590177-39590503,
           39590780-39591061,39591148-39591621,39591730-39591813,
           39591850-39591939,39592024-39592247,39592503-39592600,
           39592679-39593169,39593249-39593520,39594266-39594522,
           39594672-39594890,39595007-39595167,39595249-39595441,
           39595528-39595633,39595947-39596121,39596404-39596556,
           39596663-39596794,39597120-39597184,39597754-39597819,
           39598433-39598511,39598587-39598767,39598864-39598976
          Length = 1889

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 180 KKYTPEATKNTLRHSDGWVSSLTMKPQTKGAMIEIILAKK 299
           K Y+P+ T     H DG+V +L + P    A+++I++  K
Sbjct: 548 KCYSPKPTFEFTHHDDGYVCTLALPP---SAVLQILVGPK 584


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,567,606
Number of Sequences: 37544
Number of extensions: 409943
Number of successful extensions: 1008
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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