BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11p22r (715 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0557 + 4394754-4396040 88 6e-18 12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 85 7e-17 01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 77 2e-14 05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 72 5e-13 01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 57 1e-08 09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 39 0.003 09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 36 0.042 07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 31 0.69 04_04_0387 + 24869594-24871480 29 3.7 01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 28 8.5 >11_01_0557 + 4394754-4396040 Length = 428 Score = 88.2 bits (209), Expect = 6e-18 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 9/201 (4%) Frame = -1 Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536 A++V + ++ + LM +PTY LPYL+M++ S G + D + Sbjct: 229 AIVVNNFTFHYALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHL 288 Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY--APAGDXXXXXXXXXXXVGINAGQYTG 362 I K L+V+ TRKL NT+G AIAL+ L P+G +G A G Sbjct: 289 ITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSG----AIFCSSVSLGFLALGRAG 344 Query: 361 YLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN-------DETQPSEWRKVFF 203 + + H+D+AP F+ +MGI+N + I+ + G I+ D T WR VFF Sbjct: 345 FAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFF 404 Query: 202 VASGVYFFGNLFFILFCTSKR 140 V + F + F++F T ++ Sbjct: 405 VPGYLCIFSSFIFLIFSTGEK 425 >12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 Length = 427 Score = 84.6 bits (200), Expect = 7e-17 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 9/201 (4%) Frame = -1 Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536 A++V + ++ + LM +PTY LPY +M+I S G + D + Sbjct: 228 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQDMGSSKMLPYFNMFIFSNIGGVVADHL 287 Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY--APAGDXXXXXXXXXXXVGINAGQYTG 362 I + L+++ TRKL NTIG A+AL+ L P+G +G A G Sbjct: 288 ITRRILSITKTRKLLNTIGFVVSAVALMALPLFRTPSG----TVLCSSISLGFLALGRAG 343 Query: 361 YLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN-------DETQPSEWRKVFF 203 + + H+D+AP F+ +MG++N + I+ + G I+ D T W+ VFF Sbjct: 344 FAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFF 403 Query: 202 VASGVYFFGNLFFILFCTSKR 140 V + F ++ F++F T ++ Sbjct: 404 VPGYLCIFSSIIFLIFSTGEK 424 >01_06_1363 - 36681605-36681789,36681875-36681908,36682017-36682154, 36682578-36682724,36682821-36682865,36683043-36683331, 36683443-36683669,36684109-36684528 Length = 494 Score = 76.6 bits (180), Expect = 2e-14 Identities = 48/181 (26%), Positives = 91/181 (50%) Frame = -1 Query: 682 GFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVIIRNKWLNVSNT 503 G+F +++ MP Y LP++ M +L + G ++D +I+N +++ T Sbjct: 313 GYFVILSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNG-TSITLT 371 Query: 502 RKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYLLVHIDLAPNFS 323 RK+ TIG GP +AL+GL+ A + VG+ + ++G+L+ ++AP ++ Sbjct: 372 RKIMQTIGFVGPGVALLGLNAAKS--PVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYA 429 Query: 322 ASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFILFCTSK 143 L G++N +I+ + GF V+ + +R + S +YF LF+ +F T + Sbjct: 430 GVLHGMSNTAGTFAAILGTVGAGFFVD---RMGSFRGFLILTSLLYFSSTLFWDIFATGE 486 Query: 142 R 140 R Sbjct: 487 R 487 >05_05_0059 + 22011168-22011662,22012668-22012894,22013029-22013377, 22013464-22013508,22013589-22013735,22013851-22013988, 22014126-22014159,22014258-22014430 Length = 535 Score = 71.7 bits (168), Expect = 5e-13 Identities = 44/189 (23%), Positives = 88/189 (46%) Frame = -1 Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536 A+IVA+ NWG+F L++ MP Y +P+ M + + G D + Sbjct: 347 AIIVANVVNNWGYFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFL 406 Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYL 356 I++ + +V+ RK+ +IG GP ++L+ L +A + +++ GY Sbjct: 407 IKSGF-SVALVRKIMQSIGFIGPGVSLLCLRFAQT--PSVAAVLMTIALSLSSFSQAGYF 463 Query: 355 LVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFG 176 D+AP ++ SL G+TN + + +I++ + G+ V ++ + + +YF Sbjct: 464 CNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQ---WLGSFQAFLTLTAVLYFSA 520 Query: 175 NLFFILFCT 149 +F+ + T Sbjct: 521 TVFYNTYAT 529 >01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672, 9914110-9914325,9914436-9914645,9914722-9914859, 9915076-9915177,9915508-9915603 Length = 478 Score = 57.2 bits (132), Expect = 1e-08 Identities = 32/92 (34%), Positives = 50/92 (54%) Frame = -1 Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536 A+IV+H NWG F L+T MPTY LP+L+M + + G++ D + Sbjct: 342 ALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTL 401 Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSY 440 + ++ L+V+ RK+ +IG GPA L LS+ Sbjct: 402 V-SRGLSVTTVRKIMQSIGFLGPAFFLTQLSH 432 >09_06_0242 - 21806370-21806483,21806574-21806660,21806865-21806917, 21806999-21807140,21807406-21807501,21808617-21808785, 21808859-21808939,21809032-21809106,21810322-21810387, 21811013-21811158,21811898-21812344 Length = 491 Score = 39.1 bits (87), Expect = 0.003 Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Frame = -1 Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXX 413 P SM I S + ++I + ++ + RK+ TI PA ++ S Sbjct: 334 PLGSMIITSIAAPFADNLI--SNGVDTTKVRKICQTIAFLSPATFMMLSSVDLGVPPWEI 391 Query: 412 XXXXXXXVGINAGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDET 233 + +++ +G H D++ +++ L+GITN + + I+ + G+++ D T Sbjct: 392 VAFLTSGLALSSFALSGLYCTHQDISREYASILLGITNTVGAVPGIVGVALTGYLL-DTT 450 Query: 232 QPSEWRKVFFVASGVYFF--GNLFFILFCTSKRQPW--NEPKES 113 W + A ++F+ G ++ F +S+ Q + +EP+ S Sbjct: 451 H--SW-SISLFAPSIFFYLTGTAVWLAFASSEPQEFSKSEPESS 491 >09_06_0351 + 22466160-22466217,22466514-22467052,22467186-22467293, 22467391-22467546,22467916-22468131,22468639-22468776, 22468880-22468981,22469089-22469146,22469346-22469408, 22469543-22469640 Length = 511 Score = 35.5 bits (78), Expect = 0.042 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = -1 Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLS 443 P+L+M I + G++ D ++ + ++++N RK+ +IG GPA+ L LS Sbjct: 375 PWLTMAIFANIGGWIADTLV-GRGVSITNVRKIMQSIGFLGPALFLTLLS 423 >07_03_1115 - 24076506-24076677,24077169-24077266,24077622-24077743, 24079059-24079235,24079809-24079897,24079919-24079965, 24080423-24080519,24080600-24080682,24080716-24080796, 24081043-24081199,24081323-24081750,24081985-24082014, 24083180-24083300,24083432-24083697 Length = 655 Score = 31.5 bits (68), Expect = 0.69 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 37 SFYFKYNLCLFAFQLPCFLVPSIQYQTPLVH 129 S +F+YNL LF FL IQ++ P+V+ Sbjct: 429 SIFFRYNLSLFLHHYGNFLAALIQFRNPIVY 459 >04_04_0387 + 24869594-24871480 Length = 628 Score = 29.1 bits (62), Expect = 3.7 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 212 FTPFRWLGLVVNDEAANQRSDDRNNIGQEVGD 307 + P+ W G+VV + SDDR ++ EV D Sbjct: 195 YGPYSWRGIVVGPPIRGRFSDDRVSLMSEVSD 226 >01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375, 39586479-39586640,39586753-39586877,39586992-39587030, 39587290-39587476,39587643-39587713,39589371-39589564, 39589656-39589767,39589899-39590082,39590177-39590503, 39590780-39591061,39591148-39591621,39591730-39591813, 39591850-39591939,39592024-39592247,39592503-39592600, 39592679-39593169,39593249-39593520,39594266-39594522, 39594672-39594890,39595007-39595167,39595249-39595441, 39595528-39595633,39595947-39596121,39596404-39596556, 39596663-39596794,39597120-39597184,39597754-39597819, 39598433-39598511,39598587-39598767,39598864-39598976 Length = 1889 Score = 27.9 bits (59), Expect = 8.5 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +3 Query: 180 KKYTPEATKNTLRHSDGWVSSLTMKPQTKGAMIEIILAKK 299 K Y+P+ T H DG+V +L + P A+++I++ K Sbjct: 548 KCYSPKPTFEFTHHDDGYVCTLALPP---SAVLQILVGPK 584 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,567,606 Number of Sequences: 37544 Number of extensions: 409943 Number of successful extensions: 1008 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1000 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1851002996 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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