Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p22r
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) 97 1e-20
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 81 1e-15
SB_32244| Best HMM Match : DUF1301 (HMM E-Value=5.1) 66 4e-11
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 60 2e-09
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 57 1e-08
SB_22205| Best HMM Match : DUF805 (HMM E-Value=7.7) 51 1e-06
SB_58676| Best HMM Match : FUN14 (HMM E-Value=0.16) 50 1e-06
SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4) 50 1e-06
SB_48117| Best HMM Match : LANC_like (HMM E-Value=2.3) 50 2e-06
SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-06
SB_29703| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-06
SB_43990| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_12292| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_20577| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 36 0.025
SB_42521| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_29126| Best HMM Match : FUN14 (HMM E-Value=1.8) 33 0.17
SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_40992| Best HMM Match : DUF1531 (HMM E-Value=5.7) 32 0.40
SB_27540| Best HMM Match : Laminin_EGF (HMM E-Value=5.4e-12) 32 0.40
SB_48653| Best HMM Match : ABC_membrane (HMM E-Value=0.34) 30 1.6
SB_24563| Best HMM Match : Mad3_like (HMM E-Value=0.71) 30 1.6
SB_5991| Best HMM Match : PepSY_TM (HMM E-Value=6.3) 30 2.1
SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_11193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005) 29 3.7
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 28 6.5
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5) 28 8.6
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 28 8.6
SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4) 28 8.6
>SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41)
Length = 366
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/159 (32%), Positives = 83/159 (52%)
Frame = -1
Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXX 413
PYL M I G++ D + R + L + RK FNT+G AI L+ Y D
Sbjct: 197 PYLVMSIFVQLGGHLADCLRRKQILTTTAVRKTFNTVGFVTQAICLVAAGYTT--DWMTA 254
Query: 412 XXXXXXXVGINAGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDET 233
VG+ ++G+ + H+D+AP F+ L+GI+N +A I I +PL+ G+I
Sbjct: 255 VACLTVAVGVGGLAFSGFFVNHLDIAPQFAGILLGISNTVATIPGIFSPLLTGYIA---- 310
Query: 232 QPSEWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKE 116
EWR VF++ +Y G +F+ +F + ++Q W + +E
Sbjct: 311 -AVEWRIVFYIGGAIYAAGAVFYAVFASGEKQTWADDQE 348
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 80.6 bits (190), Expect = 1e-15
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Frame = -1
Query: 688 NWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMG-YMTDVIIRNKWLNV 512
+WG + L+ +P Y+ P+L + +S P+G + D++ R +L
Sbjct: 256 DWGLYVLLICVPLYLLDVIHYDVHHMGFVAATPFL-LKAISCPVGGCVADMLRRRGYLRT 314
Query: 511 SNTRKLFNTIGHW-GPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQ-YTGYLLVHIDL 338
+ R+LF G G I L G P G+ +G Y G+ + +D+
Sbjct: 315 ISVRRLFYCAGATAGMFIVLSGYIAHPV-----YVVIVVGLAGLMSGLIYPGFQVNMLDI 369
Query: 337 APNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFIL 158
AP S+ +MG+ N + I P++ GF+ ++T EWR VF+ VY G F L
Sbjct: 370 APRNSSIIMGLCNTIGGTTGFITPMMVGFMTRNKTA-EEWRLVFWTTLLVYIIGATVFCL 428
Query: 157 FCTSKRQPWNEPKESDIES 101
+ RQ W++PKE + ++
Sbjct: 429 LVSVDRQQWDKPKEPNTQT 447
>SB_32244| Best HMM Match : DUF1301 (HMM E-Value=5.1)
Length = 149
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/90 (33%), Positives = 50/90 (55%)
Frame = -1
Query: 370 YTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASG 191
Y G+ + +D+AP S+ +MG+ N + I P++ GF+ ++T EWR VF+
Sbjct: 35 YPGFQVNMLDIAPRNSSIIMGLCNTIGGTTGFITPMMVGFMTRNKTA-EEWRLVFWTTLL 93
Query: 190 VYFFGNLFFILFCTSKRQPWNEPKESDIES 101
VY G F L + RQ W++PKE + ++
Sbjct: 94 VYIIGATVFCLLVSVDRQQWDKPKEPNTQT 123
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Frame = -1
Query: 532 RNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYLL 353
RN WL+ + + T G G ++ YA + V + ++GY +
Sbjct: 509 RNDWLDEKDDEMM--TDGALGAGSFIVIAGYAT--NATAAVSIMCVGVAASGLLHSGYNV 564
Query: 352 VHIDLAPNFSASLMGITNFLANIISIIAPLVCGFI-VNDETQPSEWRKVFFVASGVYFFG 176
+D+AP ++ +MG+ N L ++PL+ G + VN E + EWR VF++ VY G
Sbjct: 565 NMLDIAPPYACIIMGLCNTLGTTAGFLSPLLVGIVTVNKEAR--EWRTVFWITFFVYLVG 622
Query: 175 NLFFILFCTSKRQPW 131
+ F F + QPW
Sbjct: 623 AIVFCTFMSGDLQPW 637
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Frame = -1
Query: 715 AVIVAHCGQNWGFFTLMTEMPTYMXXXXXXXXXXXXXXXXLPYLSMYILSFPMGYMTDVI 536
AV V C +WG++ +T +P++ LP+++ I+ GY++D +
Sbjct: 190 AVTVEGCAYSWGWYMFLTGLPSFFKEVLDFDIKKNGALTALPFIATLIVKNTSGYVSDRL 249
Query: 535 IRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGINAGQYTGYL 356
++ ++ S RK + A L+ + + G + G Y
Sbjct: 250 QKHPSISRSVVRKGMTFLSFLFAATLLVPVGFLNCSQQNISVLLLTLSCG-SLGLYAPTG 308
Query: 355 LVH-IDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDE 236
+ +DL+P F+ M I N +NI I+ P V G + N+E
Sbjct: 309 SANSVDLSPRFAGVTMAIYNCFSNITGILVPTVIGLMTNNE 349
>SB_22205| Best HMM Match : DUF805 (HMM E-Value=7.7)
Length = 347
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = -1
Query: 223 EWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKESDIES 101
+W+KV+++ +G+Y FG + F TSK QPWN P E ++ S
Sbjct: 179 QWQKVYYIGAGIYVFGAVAFAALGTSKEQPWNTPPEDNLVS 219
>SB_58676| Best HMM Match : FUN14 (HMM E-Value=0.16)
Length = 217
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = -1
Query: 370 YTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASG 191
Y GY + +D+AP + +MGI N + I+P++ GF+ ++ +EWR VF+V
Sbjct: 35 YAGYTVNMLDIAPRCAGVIMGICNTVGTTAGFISPMLVGFLTQHKS-AAEWRIVFWVGGI 93
Query: 190 VYFFGNLFFI 161
+ F G + I
Sbjct: 94 IMFVGTIKLI 103
>SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4)
Length = 123
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/115 (28%), Positives = 53/115 (46%)
Frame = -1
Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXX 413
PY+ + G + D +I+NK L+V NTR+ T+G +I ++ YA
Sbjct: 8 PYVLKAFVGPTGGVIVDWLIKNK-LSVKNTRRCVFTVGCTVASIFVLATGYA--NQPYLA 64
Query: 412 XXXXXXXVGINAGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFI 248
VGI GY + +D+AP ++ +MG+TN I+P + G I
Sbjct: 65 VGLLTIGVGITGINAAGYAVNILDIAPKYAGVIMGVTNVFGAAPGFISPQIVGII 119
>SB_48117| Best HMM Match : LANC_like (HMM E-Value=2.3)
Length = 440
Score = 50.0 bits (114), Expect = 2e-06
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1
Query: 223 EWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKESDI 107
+W+KV+++ +G+Y FG + F TSK QPWN P E ++
Sbjct: 355 QWQKVYYIGAGIYVFGAVAFAALGTSKEQPWNTPPEENL 393
>SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 43.6 bits (98), Expect(2) = 2e-06
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 367 TGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN 242
+G+ + H+D+AP ++ LMGITN + I AP V G+I N
Sbjct: 134 SGFNVNHLDIAPRYAGILMGITNSFGTVPGIAAPYVAGWITN 175
Score = 25.8 bits (54), Expect(2) = 2e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIG 479
PY + ++ G + D ++R + +VS+ RK+F G
Sbjct: 93 PYSTQWLFIVIAGQIADWLLRRRISSVSDVRKVFCVTG 130
>SB_29703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 43.6 bits (98), Expect(2) = 2e-06
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 367 TGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVN 242
+G+ + H+D+AP ++ LMGITN + I AP V G+I N
Sbjct: 95 SGFNVNHLDIAPRYAGILMGITNSFGTVPGIAAPYVAGWITN 136
Score = 25.8 bits (54), Expect(2) = 2e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 592 PYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIG 479
PY + ++ G + D ++R + +VS+ RK+F G
Sbjct: 54 PYSTQWLFIVIAGQIADWLLRRRISSVSDVRKVFCVTG 91
>SB_43990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 48.0 bits (109), Expect = 8e-06
Identities = 33/108 (30%), Positives = 50/108 (46%)
Frame = -1
Query: 559 MGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDXXXXXXXXXXXVGIN 380
M + D + + ++++N RKLF G + I LI ++Y P +G
Sbjct: 1 MTRLADFMNTKEVMSMTNIRKLFTCGGCFLQCICLITVAYTP-----YKVVPIVIGLGSI 55
Query: 379 AGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDE 236
A Y G + D+AP +S +MG+ N L I+ PLV G IV E
Sbjct: 56 ATMYVGAGVNPFDIAPRYSGIIMGMANTLKTFNGIMGPLVVGLIVKSE 103
>SB_12292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 313 MGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFILFCTSKRQP 134
MG+TN A+ I+P + G + + Q EWR VF++ VY + + C+ RQP
Sbjct: 1 MGLTNTFASTPGFISPQITGIVTKHKKQ-EEWRIVFWITMIVYVVAVIGYSALCSGYRQP 59
Query: 133 WNEPKES-DIESKEPENKAAER 71
W ++ ++ KE + + ++
Sbjct: 60 WAGGRDQVELSEKERDEENGKK 81
>SB_20577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -1
Query: 343 DLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDE 236
D+AP +S +MG+ N LA I+APLV G IV E
Sbjct: 42 DIAPRYSGIIMGMANTLATFNGIMAPLVVGLIVKSE 77
>SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 343 DLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDE 236
D+AP +S +MG+ N LA I+AP V G IV E
Sbjct: 221 DIAPRYSGIIMGMANTLATFNGIMAPPVVGLIVKSE 256
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 715 AVIVAHCGQNWGFFTLMTEMPTY 647
A+++ H G WG++TL T MPTY
Sbjct: 345 AIVIGHFGACWGYYTLFTGMPTY 367
>SB_42521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 35.9 bits (79), Expect = 0.033
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 226 SEWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKESDIE 104
+ W+ VFF+++G+Y G + F+ + WN P++ I+
Sbjct: 4 AHWQIVFFISAGLYVIGAISFVTLSKGSERRWNIPEKDMIQ 44
>SB_29126| Best HMM Match : FUN14 (HMM E-Value=1.8)
Length = 204
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 370 YTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFI 248
++GY + +D+AP ++ +MG+ N L ++PL+ G +
Sbjct: 36 HSGYNVNMLDIAPPYACIIMGLCNTLGTTAGFLSPLLVGIV 76
>SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 346 IDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDE 236
+D+A S ++MG+ N + I+AP+V G IV +
Sbjct: 263 LDIATRLSCAIMGMANTFSTFNGIMAPIVAGLIVRSQ 299
>SB_40992| Best HMM Match : DUF1531 (HMM E-Value=5.7)
Length = 104
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 223 EWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKESDIESKEPENKAAERQTD 62
EWR VF++ VY G + F L + +Q W S + +E K + + D
Sbjct: 4 EWRVVFWITFIVYIVGIVLFGLLVSGDKQKWAMDDPSGEKDEEKGEKKKQLKAD 57
>SB_27540| Best HMM Match : Laminin_EGF (HMM E-Value=5.4e-12)
Length = 674
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 283 ISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGN----LFFILFCTSKRQPWNEPKE 116
I++ A C F+V+ + S+W +V +G+ F + IL C KR+P + P E
Sbjct: 501 ITVFALTCCFFVVSQHSLSSQWSNEIWVGAGLGVFLAVAIVIIVILLCFLKRRPPSPPPE 560
>SB_48653| Best HMM Match : ABC_membrane (HMM E-Value=0.34)
Length = 264
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -1
Query: 328 FSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEW--RKVFFVASGVYF--FGNLFFI 161
F +L+GI + + + II PL G++VN SE R F A GV F N F I
Sbjct: 23 FRYTLLGIFAIITDALRIIQPLFLGYLVNFFAIGSEMTQRDAFLFAFGVAVCSFLNSFLI 82
Query: 160 LFCTSKRQ 137
T RQ
Sbjct: 83 TPFTYLRQ 90
>SB_24563| Best HMM Match : Mad3_like (HMM E-Value=0.71)
Length = 235
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 165 KNRFPKKYTPEATKNTLRHSDG-WVSSLTMKPQTKGAMIEIILAKKLVM 308
K FP K TPE + H D W + L +K Q + + I+ +K+++
Sbjct: 4 KKTFPDKETPEVKLPLIVHVDPVWPAHLRLKKQQRKSSFRDIVKRKMIL 52
>SB_5991| Best HMM Match : PepSY_TM (HMM E-Value=6.3)
Length = 140
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = -1
Query: 295 LANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFILFCTSKR 140
+ ++ I+ + G+I++ W+ VF + + + G+LF+I+F T+KR
Sbjct: 90 VTSVPGILGVYLTGYILH---ATGSWQVVFQITAVICSVGSLFYIMFGTTKR 138
>SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 151 TSKRQPWNEPKESDIESKEPENKAAERQTDT 59
+S Q EP E DIE E +N AER+T +
Sbjct: 28 SSASQSAPEPSEPDIEQSEIQNSPAERKTQS 58
>SB_11193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = -1
Query: 388 GINAGQYTGYL-LVHIDLAPNFS--ASLMGITNFLANIISIIAPLVCGFIVNDETQPSEW 218
GI G Y G + +V +++ FS + GI F + ++ P G + +T S +
Sbjct: 364 GILDGSYIGLMSIVTLEIV-GFSKISPAWGILFFCQSFTYLLGPPAAGLLY--DTVKS-F 419
Query: 217 RKVFFVASGVYFFGN--LFFILFCTSKRQPWNEPKESDIESKEP 92
+ VF++ASG FG L F+ +K Q + + + S P
Sbjct: 420 KPVFYLASGPMIFGGVILLFVSCAQTKTQTKTVIETASLSSNSP 463
>SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 368 HRILASTHRFGSKFQRITNGHHQLLGQYYFDHRSFGLRLHR 246
H I+ +R T GHH L +Y HRS G+ +HR
Sbjct: 889 HNIIVKNNRRVQALTSETCGHHCL---FYLSHRSRGIPMHR 926
>SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005)
Length = 480
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 340 LAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFI 161
+AP+ SA MG+ ++ +I P +CG I + + + F+V GV LF
Sbjct: 382 VAPSKSAMGMGMGFMTCSVAILIGPPICGLIAD---KFGSYIPSFYVLGGVDVAAALFPW 438
Query: 160 LFC--TSKRQPWNEPKE 116
+ C +R P + +E
Sbjct: 439 ILCLFRDERHPMAQSEE 455
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 150 VQNNIKNRFPKKYTPEATKNTLRHSDGWVSSLTMKPQTKGAMIEIILAKKLVMPISDALK 329
VQ+ I + F K++ EA L+ +G + T +G +I + +K+ ++DAL
Sbjct: 293 VQDGIYDEFAKRFA-EAVDQQLKIGNGMDAGTT-----QGPLINKMAVEKVERHVADALS 346
Query: 330 FGAKSM 347
GAK M
Sbjct: 347 KGAKLM 352
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 428 RHSTGCRDVNSGSRYQCWAVHRILASTHRFGSKFQRITNGHHQ 300
R GC+D +R AV +HR S QR+ +G H+
Sbjct: 1054 RFDRGCKDCEKATRM---AVFTYYPCSHRVASSSQRVASGSHR 1093
>SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5)
Length = 541
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 180 KKYTPEATKNTLRHSDGWVSSLTMKPQTKGAMIEIILAKKLVMPISDALKF 332
KK TP+ +K L+HS G V +K ++ KL +P++D +K+
Sbjct: 108 KKTTPKRSKRKLKHSQGDVK------YSKRTETQLDRMSKLSIPLTDVVKY 152
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -2
Query: 324 AHH*WASPTSWPILFRSSLLWFAASSLTTRPNHRNGVKYSSWLQEYTSSGTC 169
AH A+P + + + + A + T P R G ++S W + T S C
Sbjct: 1536 AHAEGAAPAPFSRMHAAHSMTAAGTERVTTPPSRRGCRHSRWPRRITCSDDC 1587
>SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4)
Length = 422
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 180 KKYTPEATKNTLRHSDGWVSSLTMKPQTKGAMIEIILAKKLVMPISDALKF 332
KK TP+ +K L+HS G V +K ++ KL +P++D +K+
Sbjct: 83 KKTTPKRSKRKLKHSQGDVK------YSKRTETQLDRMSKLSIPLTDVVKY 127
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,140,195
Number of Sequences: 59808
Number of extensions: 489597
Number of successful extensions: 1405
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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