Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p22f
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 87 1e-17
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 79 2e-15
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 68 7e-12
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 64 6e-11
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 62 3e-10
11_01_0557 + 4394754-4396040 60 1e-09
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 50 1e-06
02_05_1340 + 35797923-35799881 36 0.026
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 34 0.10
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 33 0.14
02_04_0279 + 21545317-21546192,21547331-21547667,21547795-21547931 30 1.7
09_02_0250 + 6266818-6267029,6267230-6267287,6267999-6268118,627... 29 2.9
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 29 2.9
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797 29 2.9
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 28 5.1
11_06_0037 - 19478885-19480472,19483125-19483267 28 5.1
07_03_0279 + 16211180-16211410,16211516-16211659,16212466-162125... 28 5.1
06_01_0440 + 3127197-3127700,3128299-3128670 28 5.1
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389... 28 5.1
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 28 5.1
10_08_0120 + 14972010-14973197 28 6.8
06_03_0757 + 24267599-24268882 28 6.8
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 28 6.8
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245... 27 8.9
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/123 (36%), Positives = 72/123 (58%)
Frame = +2
Query: 188 RVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITI 367
RVN+S+AI+ M+ E F WS + ++ SSFFWGY++ Q+ G A +FGGK ++
Sbjct: 199 RVNMSIAILPMSSE-----FGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGF 253
Query: 368 SVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTT 547
V ++ ++L P AAKIG + V R G + P M++++S+WVP+ E+
Sbjct: 254 GVVWWSIATVLTPLAAKIG-LPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLA 312
Query: 548 IVY 556
+VY
Sbjct: 313 LVY 315
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/123 (34%), Positives = 68/123 (55%)
Frame = +2
Query: 188 RVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITI 367
RVN+S+AI+ M+ E F W+ ++ SSFFWGY++ Q+ G A GGK ++
Sbjct: 137 RVNMSIAILPMSAE-----FGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGF 191
Query: 368 SVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTT 547
V ++ + L P AAK+G + V R G + P M++++S+WVP+ E+
Sbjct: 192 GVIWWSIATALTPFAAKLG-LPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLA 250
Query: 548 IVY 556
+VY
Sbjct: 251 LVY 253
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 67.7 bits (158), Expect = 7e-12
Identities = 38/115 (33%), Positives = 62/115 (53%)
Frame = +2
Query: 188 RVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITI 367
RV +S+AIV ++ + + W+ S VV SSF WGY++ + G L +GGK ++
Sbjct: 115 RVVMSVAIVPLS-----QAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAY 169
Query: 368 SVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEK 532
V++ +L + L P AA W L R+L G + P M+++V +W P E+
Sbjct: 170 GVALWSLATFLSPWAAARSLW-LFLSTRVLLGMAEGVALPSMNNMVLRWFPRTER 223
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 64.5 bits (150), Expect = 6e-11
Identities = 36/115 (31%), Positives = 59/115 (51%)
Frame = +2
Query: 188 RVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITI 367
RV +S+A+V + + WS S +V SSF WGYV + G LA ++GGK ++
Sbjct: 140 RVVMSVAVVPFAAQ-----YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAG 194
Query: 368 SVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEK 532
+ ++ +L + L P AA L+ + R L G + +P M + +W P E+
Sbjct: 195 AAALWSLATFLTPWAASQSTIMLLAI-RALFGLAEGVAFPTMSTFLPKWFPTHER 248
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +2
Query: 188 RVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITI 367
+VN+S+AI+ M+ + + W+ S +V SSFFWGY + Q+P G LA+ FGG+ ++ I
Sbjct: 149 KVNLSVAIIPMSHQ-----YGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEI 203
Query: 368 SVSVNALISLLLPTAA 415
V +L + ++P A
Sbjct: 204 GVVAWSLATAIIPAVA 219
>11_01_0557 + 4394754-4396040
Length = 428
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/89 (30%), Positives = 55/89 (61%)
Frame = +2
Query: 266 QSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLVCV 445
+ ++LS F++GYV+ Q+P G A++ GG+ ++ +S + + I ++P L+ +
Sbjct: 45 KGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVPLDP--NRVILLVL 102
Query: 446 CRILQGFTQAFVYPCMHHLVSQWVPLEEK 532
R+L G Q ++P +H +++QWVP +E+
Sbjct: 103 SRLLVGVAQGLIFPSIHTVLAQWVPPQER 131
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/79 (29%), Positives = 47/79 (59%)
Frame = +2
Query: 296 GYVILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQA 475
G + ++P G A++ GG+ ++ +S + +LI L+P K ++ + R+ G Q
Sbjct: 49 GEYLWEIPGGWAAQRIGGRRVLLLSFVLWSLICGLIPLDPKRE--VILVLSRLFVGVAQG 106
Query: 476 FVYPCMHHLVSQWVPLEEK 532
F++P +H +++QWVP +E+
Sbjct: 107 FIFPAIHTVLAQWVPPQER 125
>02_05_1340 + 35797923-35799881
Length = 652
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/97 (21%), Positives = 49/97 (50%)
Frame = +2
Query: 260 SVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLV 439
++Q +V+++ G I+ +G L+ G +P++ S + +L LL+ + + ++
Sbjct: 44 ALQGLVVATSLIGATIVTTFSGPLSDSRGRRPMLIASALLYSLAGLLMLWSPNV---PIL 100
Query: 440 CVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTTI 550
+ R++ GF + +S+ P + +GLL T+
Sbjct: 101 LLARLVDGFAIGLAVTLVPVYISETAPPDTRGLLNTL 137
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/96 (19%), Positives = 47/96 (48%)
Frame = +2
Query: 263 VQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLVC 442
++ ++++ G I+ +G +A FG +P++ S + + L++ A + ++
Sbjct: 44 IEGLIVAMSLIGATIITTFSGAVADSFGRRPMLIASAVLYFVSGLVMLWAPNV---YVLL 100
Query: 443 VCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTTI 550
+ R++ GF + +S+ P + +GLL T+
Sbjct: 101 LARLIDGFGIGLAVTLVPLYISETAPTDIRGLLNTL 136
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/107 (19%), Positives = 53/107 (49%)
Frame = +2
Query: 230 RKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISLLLPT 409
+K+ + +V+ ++++ G I+ +G ++ G +P++ +S + L SL++
Sbjct: 62 KKEFKLESEPTVEGLIVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLW 121
Query: 410 AAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTTI 550
+ + ++ + R++ GF + +S+ P E +GLL T+
Sbjct: 122 SPNV---YVLLLARLIDGFGIGLAVTLVPLYISETAPSEIRGLLNTL 165
>02_04_0279 + 21545317-21546192,21547331-21547667,21547795-21547931
Length = 449
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 320 LAPEVSRSPRKMRTRPRTAHCGSSRNTRLSSHQSCLRWPCL 198
L P S S + + + A C S L S +SCL W C+
Sbjct: 13 LLPRKSLSSSSAQRKQQYARCVSHAGDELHSFRSCLAWMCV 53
>09_02_0250 +
6266818-6267029,6267230-6267287,6267999-6268118,
6272359-6272511,6273381-6273586,6274280-6274733,
6276573-6276610,6276923-6277046,6277184-6277246,
6277350-6277412,6277526-6278152,6278267-6278294,
6278373-6278413,6278689-6278851,6278987-6279039,
6279217-6279262,6279373-6279444,6279578-6279741,
6279968-6280099,6280249-6280565,6280721-6280892,
6281009-6281107,6281275-6281349,6281446-6281504,
6281647-6281836,6281982-6282020
Length = 1255
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 448 PNPPRLHAGIRVPLYAPSRQPVGTSGRERIAHHHCLRRW 564
P PP LH G R PL AP RQ G R +++H R W
Sbjct: 224 PIPPPLHLGYRPPL-APIRQ--GYRHRSSNSNNHNNRGW 259
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 275 VLSSFFWGYVILQVPAGELARKFGGKPLITISV 373
V +S+F VP G A K+G KP I IS+
Sbjct: 42 VAASYFLARTFSSVPWGIFADKYGRKPCIVISI 74
>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
Length = 518
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/112 (22%), Positives = 49/112 (43%)
Frame = +2
Query: 218 MTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISL 397
M+ ++D Y + V + +SSF+ ++ + AG L + G + + I+ V
Sbjct: 70 MSSAKQDAYCIFDSQVLNAFVSSFYLSTMVASLVAGHLTKTLGRRNSLLIA-GVLFFAGT 128
Query: 398 LLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTTIV 553
LL AA + ++ + RIL G F +++ P +G T+ +
Sbjct: 129 LLNLAAV--NISMLIIGRILLGVAVGFSSLAAPVYLAEISPARWRGAFTSSI 178
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 183 MNATSIARKSSIVWT*RMPRPLGLISNAFVAT 88
+ AT S+I T +PRP G ISNA ++T
Sbjct: 264 VKATQFESGSAITHTKDIPRPAGDISNAIIST 295
>11_06_0037 - 19478885-19480472,19483125-19483267
Length = 576
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 523 QRYPLADEMVHTRVHECLREALEDSADAHQF 431
+R+PL D MV + + CL E +E + F
Sbjct: 60 RRHPLVDPMVVSEIRRCLNEGIEFQGELLNF 90
>07_03_0279 +
16211180-16211410,16211516-16211659,16212466-16212597,
16213478-16213591
Length = 206
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 420 LVIGNWCASAESSKASRRHSCTLVCTISSASGY 518
LV G ++A SS AS R SCTL + ++ +GY
Sbjct: 48 LVRGVLSSAAVSSSASPRVSCTLTVSPAAVNGY 80
>06_01_0440 + 3127197-3127700,3128299-3128670
Length = 291
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 302 VILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLVCVCRIL 457
VI+ V AG R PLIT N + +++ TA IG+ +C C +L
Sbjct: 225 VIMCVRAGLFGRL---TPLITDLPPNNVTMEIIVVTAGTIGEISFLCTCVLL 273
>03_06_0203 -
32337928-32338025,32338745-32338820,32338905-32338971,
32339181-32339275,32340062-32340151,32340293-32340340,
32340764-32341069
Length = 259
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 442 RLPNPPRLHAGIRVPLYAPSRQ 507
RLP+PPR H G VPL S Q
Sbjct: 81 RLPDPPRPHGGKAVPLSGLSPQ 102
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +2
Query: 218 MTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISL 397
M+ ++D Y + V + +SSF+ ++ + AG L + G + + I+ V
Sbjct: 71 MSSAKQDAYCIFDSQVLNAFVSSFYLSTMVASLVAGHLTKTLGRRNSLLIA-GVLFFAGT 129
Query: 398 LLPTAAKIGDWKLVCVCRILQGFTQAF 478
LL AA + ++ + RIL G F
Sbjct: 130 LLNLAAV--NISMLIIGRILLGVAVGF 154
>10_08_0120 + 14972010-14973197
Length = 395
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 570 NWPPA*TMVVSNPFSSRGTHWLTRWCIQGYT 478
N P+ +++S+PFS+ G W R+C G T
Sbjct: 48 NVDPSQHLLLSSPFSAGGHTWCIRYCPIGCT 78
>06_03_0757 + 24267599-24268882
Length = 427
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 585 WIAIPNWPPA*TMVVSNPFSSRGTHW 508
W+A P+W PA V NP+ ++ W
Sbjct: 343 WVANPSWRPAGPWVCFNPWPAQQQAW 368
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 430 ETGVRLPNPPRLHAGIRVPLYAPSRQP 510
E G P+PPR H IR+ +AP P
Sbjct: 120 ELGFLRPDPPRPHPDIRILAHAPPPAP 146
>08_01_0002 -
20208-20594,21525-21671,21754-21917,22005-22162,
24533-24826,24916-25121,25216-25812,26366-27097
Length = 894
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +1
Query: 478 RVPLYA--PSRQPVGTSGRERIAHHHCLRRW 564
RVP A P R P G R H CL RW
Sbjct: 34 RVPAEAGRPLRHPCACRGSIRFVHDDCLLRW 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,544,997
Number of Sequences: 37544
Number of extensions: 385296
Number of successful extensions: 1222
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -