Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p20r
(434 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 227 6e-59
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 209 2e-53
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 201 6e-51
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 195 3e-49
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 194 9e-49
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 192 3e-48
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 124 6e-28
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 120 1e-26
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 119 2e-26
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 118 5e-26
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 110 1e-23
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 105 3e-22
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 104 7e-22
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 100 2e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 2e-19
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 96 2e-19
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 78 7e-14
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 5e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.004
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.030
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 38 0.092
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 38 0.12
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 38 0.12
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 37 0.16
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 37 0.21
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.37
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 36 0.37
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.65
UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5; Bacteria... 34 1.5
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 33 2.0
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 33 3.5
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 32 6.0
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 32 6.0
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 32 6.0
UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocyst... 31 8.0
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 227 bits (556), Expect = 6e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 209 bits (511), Expect = 2e-53
Identities = 99/120 (82%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKH 243
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 201 bits (490), Expect = 6e-51
Identities = 95/124 (76%), Positives = 109/124 (87%), Gaps = 1/124 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK+
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
Query: 20 LEEK 9
+ K
Sbjct: 121 VGGK 124
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 195 bits (476), Expect = 3e-49
Identities = 93/119 (78%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Frame = -1
Query: 356 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 177
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 176 RLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLEEKFR 3
RLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH + R
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSRAR 292
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 194 bits (472), Expect = 9e-49
Identities = 91/122 (74%), Positives = 104/122 (85%), Gaps = 1/122 (0%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 203 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 27
GK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
Query: 26 KH 21
KH
Sbjct: 217 KH 218
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 192 bits (468), Expect = 3e-48
Identities = 91/120 (75%), Positives = 105/120 (87%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
+VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKH 119
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 124 bits (300), Expect = 6e-28
Identities = 59/119 (49%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 24
V L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEK 119
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 120 bits (289), Expect = 1e-26
Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Frame = -1
Query: 362 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 183
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 182 TGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHL 18
GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 119 bits (287), Expect = 2e-26
Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
V L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKK 120
Query: 20 L 18
+
Sbjct: 121 I 121
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 118 bits (284), Expect = 5e-26
Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGGIMDHEEAR 30
I+V L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H +
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGI 120
Query: 29 RKHL 18
R+ +
Sbjct: 121 REKI 124
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 110 bits (265), Expect = 1e-23
Identities = 52/118 (44%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 179 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLEEK 9
GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++ K
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGK 122
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 105 bits (253), Expect = 3e-22
Identities = 49/118 (41%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = -1
Query: 368 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 189
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 188 NLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHL 18
L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++ L
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRL 120
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 104 bits (250), Expect = 7e-22
Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 179 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 27
+N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 100 bits (239), Expect = 2e-20
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 203 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 27
GK V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEARE 135
Query: 26 K 24
+
Sbjct: 136 E 136
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 2e-19
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -1
Query: 245 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 153
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 57.2 bits (132), Expect(2) = 2e-19
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 246
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 96.3 bits (229), Expect = 2e-19
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 24
V+L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H EA +
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAER 119
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 78.2 bits (184), Expect = 7e-14
Identities = 35/117 (29%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = -1
Query: 365 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 186
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 185 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHL 18
L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKI 120
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 5e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -1
Query: 269 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 114
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 221 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 120
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.030
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -1
Query: 239 IGEFEIVDDHRAGKIVVNLTGRLNK 165
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 37.9 bits (84), Expect = 0.092
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = -1
Query: 368 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV- 192
M++LS+ + + QV+++ SK+ + L+V+ K GYI F I D ++
Sbjct: 1 MSLLSNMISIVKVGYNARHLQVIVQN-SKLCINVLSVLYKLGYIRGFIIKDQKNITILLK 59
Query: 191 -VNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEA 33
+N + VIS ++ L + G+L+L+TS GI+ EE+
Sbjct: 60 YINNKPAVRNIAVISTPGRRTYLKHKKLEKFLTKKDSGFLILSTSKGILTDEES 113
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 37.5 bits (83), Expect = 0.12
Identities = 31/122 (25%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Frame = -1
Query: 365 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 186
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 185 LTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQFGY--LVLTTSGGIMDHEEARRK 24
+ + ++ G VIS R + + + L + GY +V++TS G++ +EEA +
Sbjct: 61 VVLKYDEKGRSVISEIKRISKSGRRVYKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYKA 120
Query: 23 HL 18
++
Sbjct: 121 NV 122
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 37.5 bits (83), Expect = 0.12
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNL 183
++D L + N + G +V+ PCSKV++ L ++++ GYI F E V K++
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVF 65
Query: 182 TGRLNKCGVISP--RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 30
N I R P + + +P G +++TS GIM AR
Sbjct: 66 LKYFNSAAAIRKIVRVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHAR 120
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 37.1 bits (82), Expect = 0.16
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 197 IVVNLTGRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 30
+ + L N VI+ R P + + +P G +++TS G+M ++AR
Sbjct: 60 LRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDAR 119
Query: 29 R 27
+
Sbjct: 120 Q 120
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 36.7 bits (81), Expect = 0.21
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
+S+ + + NA++ + V I P SK+ ++++ GYI F +DD + G + V L
Sbjct: 8 VSNYMAQLRNAQEAEQTYVDI-PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYLK 66
Query: 179 -GRLNKCGV-ISPRFDVPINDIERWTNLLP--SRQFGYLVLTTSGGIMDHEEARR 27
++ + + R P ++ LP G ++L+TS G+M +EARR
Sbjct: 67 YDEYDQPAIRMLERVSRPGRREYADSDNLPEVKNGLGIVILSTSRGVMSDKEARR 121
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.37
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 212 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 60
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 35.9 bits (79), Expect = 0.37
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
++D L + NA K +V+ P S + + ++ + GYI ++ V+D G I V L
Sbjct: 5 IADYLTRLRNAIG-AKHRVVEVPASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALK 63
Query: 179 -GRLNKCGVISPRFDVPINDIERWTNL--LPS--RQFGYLVLTTSGGIMDHEEA 33
+NK I V + ++T +P G +++TS G+M ++EA
Sbjct: 64 YDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRVINGLGIAIISTSKGVMTNKEA 117
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.65
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 365 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 222
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5;
Bacteria|Rep: 30S ribosomal protein S8 - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 132
Score = 33.9 bits (74), Expect = 1.5
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L D L I NA R K +V + P SK+ + L V+ GYI + +D GK +
Sbjct: 7 LGDMLTRIRNAISRKKSKV-VTPASKLRARVLDVLKLEGYICGYNQIDSGN-GKFEFEIE 64
Query: 179 GR-LNKCGVISP--RFDVPINDIERWTN--LLPSRQFGYLVLTTSGGIMDHEEARRKHL 18
+ VI R P + T L + G +L+T G+M EAR +++
Sbjct: 65 LKYFENSSVIRTISRISKPGRRVYVSTKSILQVANGLGISILSTPKGVMTDHEAREQNV 123
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 33.5 bits (73), Expect = 2.0
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
++D L I NA+ K V + P SKV V V+ GYI +F + D ++ + L
Sbjct: 7 IADMLTRIRNAQMVEKVSVSM-PSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALK 65
Query: 179 GRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 30
+ VI R P + R N +P G +++T G+M +AR
Sbjct: 66 YYAGR-PVIERLERVSKPGLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKAR 118
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 302 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 418
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 374 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 32.7 bits (71), Expect = 3.5
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Frame = -1
Query: 368 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 189
M+ +S L I NA K + + P SKV +++ G+I F++ D + G + V
Sbjct: 1 MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59
Query: 188 NLTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARR 27
L + ++ G I+ R P + ++ +P+ + G +++TS GIM ++A
Sbjct: 60 YL--KYDEAGGHAINNIDRVSRPGRRVYVKSDKIPTVRSGMGMSIISTSKGIMSGKQATE 117
Query: 26 KHL 18
+ L
Sbjct: 118 QKL 120
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 31.9 bits (69), Expect = 6.0
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 290 CSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW 111
C K K T H Y +E + A K++ + K IS D+ I +E W
Sbjct: 284 CLKEGEKRTTCYYAHPY-SSWERGSNENANKLIRRF---IPKGADISKYSDIQIKQVENW 339
Query: 110 TNLLPSRQFGY 78
N P R FGY
Sbjct: 340 INNYPRRMFGY 350
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 31.9 bits (69), Expect = 6.0
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 179 GRLNKCGVISPR-FDVP--INDIERWTNLLPSRQFGYLVLTTSGGIMDH 42
NK + P I I R + + L+L+T GIM H
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKKISRKELISLHLKNKMLILSTPKGIMSH 112
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 31.9 bits (69), Expect = 6.0
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -1
Query: 182 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEE 36
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE 178
>UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocystis
pacifica SIR-1|Rep: Rieske (2Fe-2S) region -
Plesiocystis pacifica SIR-1
Length = 578
Score = 31.5 bits (68), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 209 RAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 108
R G I + G+ N+ G ++P FD+P + E WT
Sbjct: 125 RNGLIYIYYAGKGNEHGEVTPAFDIPELETEGWT 158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,018,306
Number of Sequences: 1657284
Number of extensions: 7267033
Number of successful extensions: 16090
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 15818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16072
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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