Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p20r
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 227 1e-59
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 227 1e-59
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 227 1e-59
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 227 1e-59
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 227 1e-59
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 227 1e-59
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 226 2e-59
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 224 9e-59
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 193 2e-49
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 7e-04
U88836-1|AAD00655.1| 994|Homo sapiens translational activator G... 31 2.3
U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein. 31 2.3
D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein. 31 2.3
AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein. 31 2.3
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 227 bits (556), Expect = 1e-59
Identities = 106/120 (88%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 226 bits (553), Expect = 2e-59
Identities = 105/120 (87%), Positives = 115/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 224 bits (548), Expect = 9e-59
Identities = 105/120 (87%), Positives = 114/120 (95%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 193 bits (471), Expect = 2e-49
Identities = 94/120 (78%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 197 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 21
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 60 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 119
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 267
MV MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>U88836-1|AAD00655.1| 994|Homo sapiens translational activator GCN1
protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 204
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 531 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 589
Query: 205 AL*SSTISNSP 237
L ++ SP
Sbjct: 590 VLREGVLTGSP 600
>U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.
Length = 1928
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 204
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 1367 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 1425
Query: 205 AL*SSTISNSP 237
L ++ SP
Sbjct: 1426 VLREGVLTGSP 1436
>D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.
Length = 2675
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 204
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 2212 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 2270
Query: 205 AL*SSTISNSP 237
L ++ SP
Sbjct: 2271 VLREGVLTGSP 2281
>AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.
Length = 2392
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 28 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 204
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 1929 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 1987
Query: 205 AL*SSTISNSP 237
L ++ SP
Sbjct: 1988 VLREGVLTGSP 1998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,343,522
Number of Sequences: 237096
Number of extensions: 1025755
Number of successful extensions: 1718
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -