Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p18f
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 443 SRASPPEAKDLRTRLKMRISPSAEPTD 363
           S  S  E KD+ T L    SP+ +P D
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDD 142


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
          protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 34 MKAFIFALALACV 72
          M A +F LALAC+
Sbjct: 1  MTAIVFLLALACL 13


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
          protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 34 MKAFIFALALACV 72
          M A +F LALAC+
Sbjct: 1  MTAIVFLLALACL 13


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 293 CICVVSATSAPDST*SWLF 349
           C C  S +  P ST  W F
Sbjct: 554 CYCYYSISIRPISTLGWFF 572


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 470 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTD 363
           E V    + ++A  P ++DL T L  +     +P D
Sbjct: 398 EEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRDPDD 433


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 DGYAGSWSPPGASD 237
           DG+   W  PGA+D
Sbjct: 138 DGFDLDWEYPGAAD 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,000
Number of Sequences: 336
Number of extensions: 1755
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)