Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p16r
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 622 DPREAPTYYKIIKEPMDLQTVERKVN 545
           DP +   YY  + +   L +++RK N
Sbjct: 451 DPSDCSVYYTCVSDGSKLVSIQRKCN 476


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 130 LTLLWFIILVTVNIIMYCIEL*NIL 56
           +  L+FII + + +I+YCI   N++
Sbjct: 241 IIFLFFIIPLIILLILYCIIAKNLM 265



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 186 LTYSCR*LFIILCKFHHILYNLQADHFK 269
           + Y CR +  +    + ILYNL +  F+
Sbjct: 332 ILYFCRIMVYLNSAINPILYNLMSSKFR 359


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 513 INSLNILYVCSFT 551
           + ++ +LY+CS+T
Sbjct: 172 VQAIEVLYICSYT 184


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 399 FVKNYLKLINDKSEIVM*RKIILGHSV 319
           F+K  +KL NDK EI   R   + +S+
Sbjct: 187 FIKLGIKLSNDKLEITACRLFKIDNSL 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,887
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)