Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p16r
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 86 3e-17
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 73 2e-13
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 71 1e-12
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 64 1e-10
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624... 60 2e-09
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 60 2e-09
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 56 2e-08
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 55 5e-08
01_06_0069 - 26169818-26169904,26170186-26170893 54 1e-07
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 52 4e-07
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 52 5e-07
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 50 3e-06
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 44 1e-04
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 44 1e-04
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 44 1e-04
04_04_1198 - 31679584-31679642,31679740-31679854,31680701-316807... 41 9e-04
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 41 0.001
02_02_0455 + 10445417-10446931,10447370-10447903,10448198-104482... 29 5.1
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 5.1
01_05_0758 + 24954701-24954793,24954907-24955086,24955676-249558... 28 6.8
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = -2
Query: 655 HKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKV-NEQTYSMLSEFIGDMTKIFDNCR 479
H AWPF EPVD R+ P YY IIK+P+DL+T+ ++V +EQ Y L F+ DM ++F N +
Sbjct: 489 HPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAK 548
Query: 478 YFNPKDSEFYRCA 440
+N D+ +Y+CA
Sbjct: 549 TYNSPDTIYYKCA 561
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = -2
Query: 676 LIKQIQLHKSAWPFMEPVDP--REAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDM 503
++K++ HKS W F PVDP P Y+ +I+ PMDL TV+RK+ + YS EF D+
Sbjct: 120 ILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADV 179
Query: 502 TKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFREKLFEAN 374
F N +NP ++ + AD L F + K K + N
Sbjct: 180 RLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKWKDRN 222
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = -2
Query: 694 FENLKRLIKQIQLHKSAWPFMEPVDPREA--PTYYKIIKEPMDLQTVERKVNEQTYSMLS 521
F+ L+K + H+ A PF+ PVD + P Y+ IIK+PMDL T+E+K+N YS
Sbjct: 163 FKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYSTPW 222
Query: 520 EFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFREKL 386
+F D+ FDN +NP ++ L+ F + K+ +KL
Sbjct: 223 DFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKL 267
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/95 (30%), Positives = 51/95 (53%)
Frame = -2
Query: 676 LIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTK 497
++ ++Q + F EPVD E P Y++II+ PMD T+ K+ +Y+ L +F D+
Sbjct: 207 ILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFL 266
Query: 496 IFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFRE 392
+ N +N D+ +YR A +EA + + R+
Sbjct: 267 LTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQ 301
>01_01_0802 +
6246267-6247541,6247625-6247682,6247806-6248129,
6248321-6248355
Length = 563
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -2
Query: 715 RELTHKDFENLKRLIKQIQLHKSAWPFMEPVDPREAPT--YYKIIKEPMDLQTVERKVNE 542
R+L F++ L+ ++ HK +W F PVD Y+ II +PMDL TV+ ++
Sbjct: 136 RKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAA 195
Query: 541 QTYSMLSEFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQK 410
Y EF GD+ F N +NPK + + A+ L F +K
Sbjct: 196 GHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEK 239
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = -2
Query: 694 FENLKRLIKQIQLHKSAWPFMEPVDPREA--PTYYKIIKEPMDLQTVERKVNEQTYSMLS 521
F+ ++K++ K + F PVD + P Y++IIK+PMDL T+ K++ +Y+ S
Sbjct: 162 FKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPS 221
Query: 520 EFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFREKL 386
EF D+ F N +NP+ + A L F + + +KL
Sbjct: 222 EFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKL 266
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -2
Query: 694 FENLKRLIKQIQLHKSAWPFMEPVDPREAPT--YYKIIKEPMDLQTVERKVNEQTYSMLS 521
F+ L+ ++ HK W F +PVD Y+ IIK PMDL T++ ++ Y
Sbjct: 316 FKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPR 375
Query: 520 EFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFF 419
EF D+ F N +NPK + + A+ L F
Sbjct: 376 EFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIF 409
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = -2
Query: 676 LIKQIQLHKSAWPFMEPVDP--REAPTYYKIIKEPMDLQTVERKV---NEQTYSMLSEFI 512
+++QI H+ A PF++PVD + YYKII +PMD T+++K+ ++ Y+ + E
Sbjct: 83 IVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIY 142
Query: 511 GDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQK 410
D+ IF N +N + + + A L F +K
Sbjct: 143 SDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEK 176
>01_06_0069 - 26169818-26169904,26170186-26170893
Length = 264
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = -2
Query: 679 RLIKQIQLHKSAWPFMEPVDPR--EAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGD 506
+L+ ++ H+ W F EPVD R YY I +PMDL TV R++ + Y+ F D
Sbjct: 58 KLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAAD 117
Query: 505 MTKIFDNCRYFNPKDSEFYRCADGLEAFF 419
+ F+N +N Y A L F
Sbjct: 118 VRLTFNNAMSYNSAGDPVYESAAELSEIF 146
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = -2
Query: 676 LIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTK 497
++ ++Q + F +PVDP E P Y+ IIK PMD T+ +K+N+ Y L +F +
Sbjct: 113 VLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEVSVRA 172
Query: 496 IFDNC 482
D C
Sbjct: 173 YGDFC 177
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGD 506
L++++ ++ ++ F +PV +EAP Y+ II+ PMDL T+ KV + Y +F D
Sbjct: 1715 LEKIVDHLRTMSCSFLFRKPVTKKEAPDYFDIIERPMDLGTIRDKVRKMEYKNREDFRHD 1774
Query: 505 MTKIFDNCRYFN 470
+ +I N +N
Sbjct: 1775 VAQIALNAHTYN 1786
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 697 DFENLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSE 518
D + L ++ ++Q + F EPVDP E P Y+ +I+ PMD TV RK+ Y +
Sbjct: 9 DRKALDMILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRRKLARNAYRSFEQ 68
Query: 517 F 515
F
Sbjct: 69 F 69
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPT--YYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRY 476
S W F PVD Y+ II+ PMDL TV+ + Y F D+ F N
Sbjct: 154 SVW-FNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDVRLTFSNALR 212
Query: 475 FNPKDSEFYRCADGLEAFF 419
+NP D +R A L A F
Sbjct: 213 YNPADHHVHRYASNLLATF 231
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = -2
Query: 673 IKQIQLHKSAWPFMEPVDPREA--PTYYKIIKEPMDLQTVERKVNEQTYSMLSEFI-GDM 503
IK++ +A PF PVDP P Y+ II PMD T+ + + M SE + D+
Sbjct: 246 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 305
Query: 502 TKIFDNCRYFNPK 464
I+DNC +N K
Sbjct: 306 QFIWDNCTKYNSK 318
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = -2
Query: 673 IKQIQLHKSAWPFMEPVDPREA--PTYYKIIKEPMDLQTVERKVNEQTYSMLSEFI-GDM 503
IK++ +A PF PVDP P Y+ II PMD T+ + + M SE + D+
Sbjct: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
Query: 502 TKIFDNCRYFNPK 464
I+DNC +N K
Sbjct: 307 QFIWDNCTKYNSK 319
>04_04_1198 -
31679584-31679642,31679740-31679854,31680701-31680790,
31682207-31683010
Length = 355
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -2
Query: 652 KSAWPFMEPV--DPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCR 479
+S W F PV D Y+ +IK PMDL TV + Y +F D+ F N
Sbjct: 17 RSIW-FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADIRLTFSNAL 75
Query: 478 YFNPKDSEFYRCADGLEAFFAQKIK 404
+NP E + A L A F + K
Sbjct: 76 RYNPAGHEVHTFAGDLLASFEKMYK 100
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -2
Query: 652 KSAWPFMEPV--DPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCR 479
+S W F PV D Y+ +IK PMDL TV + Y +F D+ F N
Sbjct: 136 RSIW-FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNAL 194
Query: 478 YFNPKDSEFYRCADGLEAFFAQKIK 404
+NP E + A L A F + K
Sbjct: 195 RYNPAGHEVHTFAGDLLASFEKMYK 219
>02_02_0455 +
10445417-10446931,10447370-10447903,10448198-10448278,
10448699-10448770,10449643-10449669
Length = 742
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 669 NKSNYIKALGLSWNLWILEKHQRI 598
N+ YI +L L W LWI ++H +
Sbjct: 585 NRKRYIGSLTLQWCLWISQEHNEM 608
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 613 EAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKI 494
E ++ + +DLQ +E++V+ Y ++EFI DM ++
Sbjct: 1956 ENSSFKGLASSTLDLQKIEQRVDGFEYGGVNEFIADMQQM 1995
>01_05_0758 +
24954701-24954793,24954907-24955086,24955676-24955870,
24955982-24956089,24956211-24956288,24956383-24956464,
24956624-24956783,24956877-24957179,24957295-24957513,
24957598-24958057,24958175-24958240,24958332-24958511
Length = 707
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 646 AWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSE 518
A+P + V P E ++++E DL + RK E+T M+ E
Sbjct: 606 AYPIIRRVVPDEDEHLNELLQEEEDLVSAHRKQVEETLDMIKE 648
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,013,395
Number of Sequences: 37544
Number of extensions: 292136
Number of successful extensions: 612
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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