Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p16r
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41) 107 1e-23
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 93 3e-19
SB_23755| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 62 6e-10
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 60 2e-09
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 58 6e-09
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35) 51 9e-07
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 48 6e-06
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1) 36 0.026
SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069) 34 0.11
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 29 3.0
SB_55846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 29 4.0
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 28 6.9
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 28 6.9
SB_46763| Best HMM Match : Isochorismatase (HMM E-Value=0.66) 28 9.1
SB_55055| Best HMM Match : rve (HMM E-Value=4.8e-05) 28 9.1
>SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41)
Length = 305
Score = 107 bits (256), Expect = 1e-23
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGD 506
LK ++ Q++ H SAWPF +PV+ EAP YY+ IK PMDL+T+ ++ YS F+ D
Sbjct: 208 LKNILTQVKNHASAWPFQKPVERAEAPDYYEHIKYPMDLKTMTERLKSGYYSSKKLFVAD 267
Query: 505 MTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIK 404
M +IF NCR +N D+E+Y+CA+ +E FF KIK
Sbjct: 268 MRRIFQNCRTYNSPDTEYYKCANTVERFFLSKIK 301
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 92.7 bits (220), Expect = 3e-19
Identities = 39/97 (40%), Positives = 63/97 (64%)
Frame = -2
Query: 694 FENLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEF 515
+ + +++ ++ H +AWPF+EPVD AP Y++II+ PMDL T+E K++ Y+ L EF
Sbjct: 357 YTGMYKVLDYLKKHNNAWPFLEPVDESYAPQYHEIIENPMDLSTIEEKLDTSKYATLDEF 416
Query: 514 IGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIK 404
DM +F+NC +N DS + + + LEA F ++IK
Sbjct: 417 QSDMKLMFENCLEYNGPDSMYTKMGNTLEAAFNRQIK 453
>SB_23755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 81.0 bits (191), Expect = 9e-16
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = -2
Query: 574 DLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFR 395
DL TVE K+ + Y+ L +F+ D+T+IFDNCR+FN KD+ +YRCA+ LEA F QK++ ++
Sbjct: 30 DLSTVEDKITSKKYATLEQFVSDVTRIFDNCRFFNGKDTPYYRCAEVLEAVFVQKLRAWK 89
Query: 394 EK 389
K
Sbjct: 90 SK 91
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPREA--PTYYKIIKEPMDLQTVERKVNEQTYSMLSEFI 512
LK ++K + H AWPF EPVD + P Y+ IIK+PMDL T+++K+ Y E I
Sbjct: 120 LKTVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECI 179
Query: 511 GDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKI 407
D + +NC +N + ++ F QKI
Sbjct: 180 EDFRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKI 214
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = -2
Query: 646 AWPFMEPVDPREAPT--YYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYF 473
AWPF +PVD Y+ IIK+PMD+ ++ K+ + Y SEF D+ +F NC +
Sbjct: 338 AWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIRLMFSNCYRY 397
Query: 472 NPKDSEFYRCADGLEAFFAQKIKYFREK 389
NP D + + A L+ F K E+
Sbjct: 398 NPPDHDVVKMARQLQDVFEMKFAKMPEE 425
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFN 470
++W F+ PVDP +AP YYK+I+ PMD TV+ K+ Y S F DM + +NC +N
Sbjct: 565 ASW-FLRPVDPNDAPGYYKVIRTPMDFGTVKHKLESGVYDDYSAFHDDMMLVKNNCFCYN 623
Query: 469 PKDSEFYRCADGLEAFFAQKIKY 401
P+ + D E F +I+Y
Sbjct: 624 PQGHDVRNDCD--EVFRFYEIEY 644
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGD 506
L++ + Q+Q F +PVD E Y +IK+PMD T+ +++ Y + +F D
Sbjct: 609 LRKTLDQVQTKDPGEIFSDPVDTNEVLDYLDVIKQPMDFSTMRSRIDSNFYHTIEQFEAD 668
Query: 505 MTKIFDNCRYFNPKDSEFYRCA 440
I +NC +N +D+ +YR A
Sbjct: 669 FNLIIENCMAYNAQDTIYYRAA 690
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/113 (27%), Positives = 59/113 (52%)
Frame = -2
Query: 724 QT*RELTHKDFENLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVN 545
QT RE + + K + + +WPF +PV+ ++ P YY++IK PMD++T+ + V
Sbjct: 790 QTLREKEEEFIQLEKEINPLLSDDPLSWPFHKPVNSKQVPDYYEVIKNPMDIETLRQHVQ 849
Query: 544 EQTYSMLSEFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKIKYFREKL 386
+ EF+ ++ + N +N ++ EF + A+ + A +K E+L
Sbjct: 850 DGMCRSREEFLENVKLLHTNSVLYNGENHEFTKTANSIYAACENILKEHEEQL 902
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNE 542
++ +I +++ +WPF PV+P+ P Y+KI+K P+DLQT+ K E
Sbjct: 751 MEGIINKMKEVDESWPFHTPVNPKTVPDYHKIVKNPIDLQTLREKEEE 798
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = -2
Query: 682 KRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNE---QTYSMLSEFI 512
++++ ++ H + PF + V + P YYK+I PMDL T+ K+ Q YS ++EF+
Sbjct: 500 EKILLELFCHSDSIPFQQKVS-KSVPNYYKVITHPMDLSTIRAKIQPQHFQHYSSITEFL 558
Query: 511 GDMTKIFDNCRYFN 470
D IF NC FN
Sbjct: 559 SDCQLIFSNCATFN 572
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 58.4 bits (135), Expect = 6e-09
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -2
Query: 685 LKRLIKQIQLHKSAWPFMEPVDPR--EAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFI 512
L++L KQ + PF PVDP+ Y++I++ PMDL T++RK++ Y E+
Sbjct: 892 LEKLYKQ---EPESLPFRSPVDPKLLGCLDYFEIVRNPMDLSTIKRKLDNGQYKNPWEYC 948
Query: 511 GDMTKIFDNCRYFNPKDSEFYRCADGLEAFFAQKI 407
D+ +FDN +N K S Y+ L F +I
Sbjct: 949 DDVWLMFDNAWLYNRKTSRVYKYCTKLSEVFESEI 983
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 58.0 bits (134), Expect = 7e-09
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = -2
Query: 715 RELTHKDFENLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQT 536
R+ KD + ++ +++ H AWPF+ PV+ ++ P YYKII++PMD T++ K+ +
Sbjct: 1290 RKQQSKDMAPCRTILAEMEKHDDAWPFLIPVNAKQFPEYYKIIRKPMDFHTMKIKLRDYQ 1349
Query: 535 Y 533
Y
Sbjct: 1350 Y 1350
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -2
Query: 637 FMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFNPKDS 458
FM+ E P YYK+I EP+ L +E + + Y+ E + D +FDN RY+N ++S
Sbjct: 541 FMDLPSSEEYPDYYKVISEPVCLSQIEGNIRDNKYATEEELLLDFEVMFDNARYYNEEES 600
Query: 457 EFYR 446
+ Y+
Sbjct: 601 QVYQ 604
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -2
Query: 616 REAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNC-RYFNPKDSEFYRCA 440
R +P YY +I P+DL +++++ Y + F DM + DN +Y+ P DS+ Y+ A
Sbjct: 52 RSSPEYYDVISTPIDLLKIQQRLKTDEYEDVGTFTADMELLLDNALKYYKP-DSQEYQDA 110
Query: 439 DGLEAFF 419
L+ F
Sbjct: 111 TQLKQVF 117
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = -2
Query: 640 PFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFNPKD 461
PF+ R P YY++IK+P+ L + ++ Y L ++ F+N + +N +
Sbjct: 358 PFLRLPSRRAYPDYYEVIKKPIALMKIRSQIKSGLYDSLEALETELELCFNNAKTYNEPN 417
Query: 460 SEFYRCADGLEAFFAQK 410
S Y+ A+ + ++K
Sbjct: 418 SMLYKDAERMLDHMSKK 434
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 607 PTYYKIIKEPMDLQTVERKVNEQTY 533
P YY +IKEP+DL+ + +V T+
Sbjct: 221 PEYYAVIKEPIDLKMISTRVRYTTW 245
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = -2
Query: 676 LIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTK 497
L+ + + A PF+ PV+ + P Y +++PMD TV RK E YS + + D+
Sbjct: 100 LLNFLMSREDAEPFLAPVNLADFPDYTDYVEQPMDFSTVWRKFVENQYSDPEQLVSDIRL 159
Query: 496 IFDNCRYFNPKD-SEFYRCADGLEAFFAQKI 407
+F N R +N + S Y L A F ++
Sbjct: 160 VFSNSRAYNTQPRSRIYSMTIRLAAMFEDRV 190
>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
Length = 432
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -2
Query: 607 PTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFN 470
P YYK I PMDL V+ K++ Y + EF+ DM IF NC+ FN
Sbjct: 2 PEYYKQIANPMDLSIVKEKLHSYQYHSVVEFVRDMNLIFSNCKDFN 47
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = -2
Query: 691 ENLKRLIKQIQLHKS-------AWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTY 533
+ +KRL+K + H A PF+ ++ P YY+IIK+P+D++ + ++N Y
Sbjct: 851 KKMKRLLKYVVKHVDEDTGRSLAEPFLILPTKKDLPDYYQIIKQPVDIRKIRERINSHKY 910
Query: 532 SMLSEFIGDMTKIFDNCRYFNPKDSEFYRCADGLEAFF 419
L + D T + N + +N + S + + L++ F
Sbjct: 911 RCLEDLDEDFTLMCRNAQTYNMEGSIIFDDSIKLQSLF 948
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -2
Query: 637 FMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFNP 467
F +PVD E Y +I+EPMDL T+ K++ YS + ++ D+ I N +NP
Sbjct: 1452 FSKPVDLEEVEDYLDVIQEPMDLSTMMEKIDRHQYSTCANYLLDIDLITSNALKYNP 1508
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = -2
Query: 637 FMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDMTKIFDNCRYFNPKDS 458
F PV+ AP Y ++I PMD T++ K++ +Y+ + F D + +N +N D+
Sbjct: 1274 FAYPVNDAIAPGYSRVITHPMDFSTIKTKIDSNSYTTIEAFRDDFYLMCNNAMVYNAPDT 1333
Query: 457 EFYRCA 440
+++ A
Sbjct: 1334 IYFKAA 1339
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = -2
Query: 643 WPFMEPVDPREAP--TYYKIIKEPMDLQTVERKVNEQTYSMLS 521
WPF+EPVD + Y++ IKEPM T+ +K +E+ Y+ ++
Sbjct: 77 WPFLEPVDAQSLGLYDYHERIKEPMCFTTIGQKFHEKVYTSIT 119
>SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1)
Length = 99
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 646 AWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTY 533
A PF+ PVD + P Y+ ++ P+DL T+ K+ + Y
Sbjct: 61 AGPFVYPVDVQAYPDYWSVVPYPIDLHTIIEKLGNRFY 98
>SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069)
Length = 42
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 562 VERKVNEQTYSMLSEFIGDMTKIFDNCRYFNPKDSEFYR 446
++ K+N Y L +F+ D +FDN +N DS+ Y+
Sbjct: 4 IQSKLNGDQYQTLDDFMADFHLMFDNACKYNEPDSQVYK 42
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 700 KDFENLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKE--PMDLQTVERKVNE 542
KD +N+K L ++ + HK+ W DP EA + +K E P + V ++V+E
Sbjct: 302 KDKDNVKALFRRAKAHKACW------DPEEARSDFKRAAELDPSLTKVVRKEVSE 350
>SB_55846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 688 NLKRLIKQIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVE 557
+++RL ++++L KS W RE Y +++ P D +T E
Sbjct: 26 DIRRLCQRLKLPKSEWLHQFVRSLREPLKEYVVLQSPADFETAE 69
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 640 PFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTYSMLSEFIGDM 503
P +PV+ E Y K+ +EP E+K +E+ +M +GD+
Sbjct: 191 PETKPVEGEEPALYQKVTEEPSAEIEQEKKDDEEDNAMEEAILGDV 236
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 456 SESFGLKYRQLSNILVISPINSLNILYVCSFTFRSTVCKSIGSLIIL*YVGASLG 620
+E FGL +L+ +VI + L + VC F+ + K+I + +L A LG
Sbjct: 471 AEPFGLMVFRLTIEVVIFAVGVLGNVLVCVVVFKERLYKAIAYVFVLNLAIADLG 525
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 216 ILCKFHHILYNLQADHFKKQRVNFVCSP-QVCTVCAHY 326
++C+F ++Y L F + N C P Q C C Y
Sbjct: 50 LVCQFDSLVYALGTPGFHCETANVTCPPKQCCENCTSY 87
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 618 GSTGSMKGQALLCNWICFISLFKFSKSL*VNSL 716
GSTGS G C F+S+F F S+ V SL
Sbjct: 575 GSTGSWAGGKAACFMSAFLSMFLFKFSMLVASL 607
>SB_46763| Best HMM Match : Isochorismatase (HMM E-Value=0.66)
Length = 439
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 667 QIQLHKSAWPFMEPVDPREAPTYYKIIKEPMDLQTVERKVNEQTY 533
Q QLHK+ W + AP YK++ P D + + K +Y
Sbjct: 34 QKQLHKAIWESFNNIATERAPLSYKLV--PKDHEFPKAKPKRTSY 76
>SB_55055| Best HMM Match : rve (HMM E-Value=4.8e-05)
Length = 228
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 658 LHKSAWPFMEPVDPREAPTYYKIIKE 581
LHK W F+ P P + Y +IK+
Sbjct: 114 LHKFNWVFISPYSPHQGGMYESLIKQ 139
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,967,544
Number of Sequences: 59808
Number of extensions: 390323
Number of successful extensions: 896
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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