Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p16r
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.56
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.56
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.56
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 24 1.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 4.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 4.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 4.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 7.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 9.2
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 25.4 bits (53), Expect = 0.56
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 363 SYH*LASNSFSRKYLIFCAKNASNPSAHR*NSESFGLKYRQLSNILVISPINSLNILYVC 542
S+H L SN+F Y K + ++ G+ ++N L SP+ S ++ YV
Sbjct: 222 SFHRLTSNTFD--YDPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYYVN 279
Query: 543 SFTFRST 563
+ FR++
Sbjct: 280 TEQFRTS 286
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 25.4 bits (53), Expect = 0.56
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 363 SYH*LASNSFSRKYLIFCAKNASNPSAHR*NSESFGLKYRQLSNILVISPINSLNILYVC 542
S+H L SN+F Y K + ++ G+ ++N L SP+ S ++ YV
Sbjct: 222 SFHRLTSNTFD--YDPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYYVN 279
Query: 543 SFTFRST 563
+ FR++
Sbjct: 280 TEQFRTS 286
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 25.4 bits (53), Expect = 0.56
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 363 SYH*LASNSFSRKYLIFCAKNASNPSAHR*NSESFGLKYRQLSNILVISPINSLNILYVC 542
S+H L SN+F Y K + ++ G+ ++N L SP+ S ++ YV
Sbjct: 222 SFHRLTSNTFD--YDPKFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYYVN 279
Query: 543 SFTFRST 563
+ FR++
Sbjct: 280 TEQFRTS 286
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 24.2 bits (50), Expect = 1.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 363 SYH*LASNSFSR--KYLIFCAKNASNPSAHR*NSESFGLKYRQLSNILVISPINSLNILY 536
S+H L SN+F KY+ S + FG+ ++N L SP++S ++ Y
Sbjct: 223 SFHRLTSNTFDYDPKYIKMMDAGESFTA----QDGIFGMALSPMTNNLYYSPLSSRSLYY 278
Query: 537 V 539
V
Sbjct: 279 V 279
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPTY 599
+A+ F P++PR PTY
Sbjct: 379 NAYRFRPPLNPRFGPTY 395
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPTY 599
+A+ F P++PR PTY
Sbjct: 390 NAYRFRPPLNPRFGPTY 406
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPTY 599
+A+ F P++PR PTY
Sbjct: 390 NAYRFRPPLNPRFGPTY 406
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 649 SAWPFMEPVDPREAPTY 599
+A+ F P++PR PTY
Sbjct: 379 NAYRFRPPLNPRFGPTY 395
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/31 (25%), Positives = 12/31 (38%)
Frame = +2
Query: 494 YFSHITNKFT*HTICLFIHFSFHCLQIHWFF 586
Y + + + CL F C+ I W F
Sbjct: 440 YVFQLLDSYAVSGFCLLFLMFFECIAISWAF 470
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/31 (25%), Positives = 12/31 (38%)
Frame = +2
Query: 494 YFSHITNKFT*HTICLFIHFSFHCLQIHWFF 586
Y + + + CL F C+ I W F
Sbjct: 493 YVFQLLDSYAVSGFCLLFLMFFECIAISWAF 523
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 465 FGLKYRQLSNILVISPINSLNILYV 539
FG+ ++N L SP+ S ++ YV
Sbjct: 255 FGMALSPVTNNLYYSPLTSHSLYYV 279
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 83 HNNIYCHKNNK 115
HN+IYC K K
Sbjct: 158 HNDIYCEKYEK 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,208
Number of Sequences: 438
Number of extensions: 3999
Number of successful extensions: 66
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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