Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p16f
         (574 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal alzh...    34   2.7  
UniRef50_A0E6N2 Cluster: Chromosome undetermined scaffold_8, who...    33   3.6  
UniRef50_Q2R301 Cluster: Expressed protein; n=7; Magnoliophyta|R...    33   4.8  
UniRef50_A4ZH72 Cluster: Orf206; n=1; Phytophthora sojae|Rep: Or...    33   4.8  
UniRef50_UPI0000DB6EA0 Cluster: PREDICTED: similar to Enhancer o...    32   8.3  
UniRef50_Q16PQ1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  
UniRef50_Q9W0T1 Cluster: Nucleosome-remodeling factor subunit NU...    32   8.3  

>UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal
           alzheimer antigen, falz; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to fetal alzheimer antigen, falz -
           Nasonia vitripennis
          Length = 2670

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 518 SIMSGRGAKKRGRPPKS 568
           S MSGRG K+RGRPPKS
Sbjct: 29  SSMSGRGTKRRGRPPKS 45


>UniRef50_A0E6N2 Cluster: Chromosome undetermined scaffold_8, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_8,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 308

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 521 LSCQLYTFQHVHRENIVLFTK 459
           +SC+ Y FQH+HR  +V+F +
Sbjct: 244 ISCKYYNFQHIHRSKVVIFVQ 264


>UniRef50_Q2R301 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 448

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 12/31 (38%), Positives = 24/31 (77%)
 Frame = +2

Query: 359 GHIVIHFMKHHKRLRT*QRWALDKLKCIITV 451
           GH+++HF KH++R++   RW++  L C++T+
Sbjct: 328 GHVIVHFKKHNERIK---RWSILSL-CLLTL 354


>UniRef50_A4ZH72 Cluster: Orf206; n=1; Phytophthora sojae|Rep:
           Orf206 - Phytophthora sojae
          Length = 206

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 313 STHSLNENQLEMYKFAQHIENAMT-RGLELIHAILKR*TPTS 191
           S  SLN N  E+YK +  I N  T +G E IH ILK   P+S
Sbjct: 101 SNESLNYNIDELYKISIEISNNCTVKGWETIHQILKDMDPSS 142


>UniRef50_UPI0000DB6EA0 Cluster: PREDICTED: similar to Enhancer of
           bithorax CG32346-PB, isoform B isoform 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to Enhancer of
           bithorax CG32346-PB, isoform B isoform 1 - Apis
           mellifera
          Length = 2558

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           M+GRG+K+RGRPPKS
Sbjct: 1   MTGRGSKRRGRPPKS 15


>UniRef50_Q16PQ1 Cluster: Putative uncharacterized protein; n=1; Aedes
            aegypti|Rep: Putative uncharacterized protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1835

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = -1

Query: 334  FSQ*NEMSTHSLNENQLEMYKFAQHIENAMTRGLELIHAILKR*TPTSYWSINETPYRFR 155
            FS+   ++T S   + +E     Q   +  T  +E+ HA++ R + T   S++  PY   
Sbjct: 1575 FSRAGALTTRSSRSDSIEQMALQQPQRSDSTDSIEMHHAVMSRASETKRDSLDSLPYSIE 1634

Query: 154  N 152
            N
Sbjct: 1635 N 1635


>UniRef50_Q9W0T1 Cluster: Nucleosome-remodeling factor subunit
           NURF301; n=8; cellular organisms|Rep:
           Nucleosome-remodeling factor subunit NURF301 -
           Drosophila melanogaster (Fruit fly)
          Length = 2669

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,645,794
Number of Sequences: 1657284
Number of extensions: 10311850
Number of successful extensions: 18382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18379
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)