Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p16f
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 207 AKHRLPIGRLTRRHIVFVICCKMKF 133
           +++R+ IG+ T  HI+  +C  + F
Sbjct: 97  SQYRVKIGKFTPEHIIPDLCTHIIF 121


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
 Frame = -3

Query: 278 VQICPTHRKR--NDARARTNTCNSKTLNTDFLL 186
           V+I   HR    ND    T+T     LN D LL
Sbjct: 197 VRIMGVHRPGFDNDCNKNTSTSKEIALNNDVLL 229


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 315 ISFYCEKLCKQ 347
           +SF C KLCK+
Sbjct: 153 LSFRCTKLCKE 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,049
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)