Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p16f
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023142-1|AAY55558.1|  704|Drosophila melanogaster IP08936p pro...    32   0.48 
BT022131-1|AAY51526.1|  704|Drosophila melanogaster IP08836p pro...    32   0.48 
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r...    32   0.48 
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,...    32   0.48 
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,...    32   0.48 
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,...    32   0.48 

>BT023142-1|AAY55558.1|  704|Drosophila melanogaster IP08936p
           protein.
          Length = 704

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


>BT022131-1|AAY51526.1|  704|Drosophila melanogaster IP08836p
           protein.
          Length = 704

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
           remodeling factor largesubunit NURF301 protein.
          Length = 2669

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
           isoform C protein.
          Length = 2159

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
           isoform A protein.
          Length = 2669

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
           isoform B protein.
          Length = 2649

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +2

Query: 524 MSGRGAKKRGRPPKS 568
           MSGRG++KRGRPPK+
Sbjct: 1   MSGRGSRKRGRPPKT 15


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,984,352
Number of Sequences: 53049
Number of extensions: 498590
Number of successful extensions: 946
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)