Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p16f
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.70 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.70 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   3.8  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   6.6  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   6.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 403 SEAFMMLH--EMYHYMSVIGYCLQSFSQ*NEMSTHSLNENQLEMYKFAQHIENAMTRGLE 230
           S   M LH  E  HY+ ++ Y L   S+  E+      E    +YK+ Q IEN +    E
Sbjct: 280 SSIIMELHNIEGTHYVKIV-YYLGIPSEARELQLPGC-EVLCPLYKYLQLIENVIPSNEE 337

Query: 229 LI 224
           LI
Sbjct: 338 LI 339


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 403 SEAFMMLH--EMYHYMSVIGYCLQSFSQ*NEMSTHSLNENQLEMYKFAQHIENAMTRGLE 230
           S   M LH  E  HY+ ++ Y L   S+  E+      E    +YK+ Q IEN +    E
Sbjct: 295 SSIIMELHNIEGTHYVKIV-YYLGIPSEARELQLPGC-EVLCPLYKYLQLIENVIPSNEE 352

Query: 229 LI 224
           LI
Sbjct: 353 LI 354


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 412 LSCSEAFMMLHEMYHYMSVIGYCL 341
           L   +AFM +  ++ +M+++ YCL
Sbjct: 304 LKAVDAFMSVCTVFVFMALMEYCL 327


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 396 RL*CFMKCITI 364
           RL C+MKCI I
Sbjct: 67  RLMCYMKCIMI 77


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 396 RL*CFMKCITI 364
           RL C+MKCI I
Sbjct: 41  RLMCYMKCIMI 51


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 453 LCFCKQNYVFTVHVLESVQLTA 518
           L FC+Q Y   V+  E   LTA
Sbjct: 460 LHFCRQMYAMKVNNAEYALLTA 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,198
Number of Sequences: 438
Number of extensions: 3098
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)