Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p13r
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein pr...    36   0.18 
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    36   0.18 
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             36   0.18 

>AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein
           protein.
          Length = 1016

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = -3

Query: 596 PWPGAQR-GRHRRPDWTKPGCHSSDYPCYGSLPLDPDRDLXXXXXXXXXXXSGS---LPG 429
           P P A+R GR  RP W +P C +S  P   +LPL     +            G    LP 
Sbjct: 23  PRPSARRRGRRGRPGWLRP-CLASQAPAAAALPLLLALKMEKMLAGCFLLILGQIVLLPA 81

Query: 428 ECPQRDHGRHVRRTR 384
           E  +R  GR + R R
Sbjct: 82  EARERSRGRSISRGR 96


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
             marker CA125 protein.
          Length = 22152

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -1

Query: 670   LTAMTIPDLSNXLQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTL 491
             +T+ TIP L+  L +P+T P+M    G      V  VL     + T ++  +  V+  TL
Sbjct: 10946 VTSTTIPILTFSLGEPETTPSMATSHGTEAGSAVPTVLPEVPGMVTSLVASSRAVTSTTL 11005

Query: 490   TEISAALESPVTNP 449
               ++ +   P T P
Sbjct: 11006 PTLTLSPGEPETTP 11019



 Score = 33.5 bits (73), Expect = 0.73
 Identities = 20/81 (24%), Positives = 38/81 (46%)
 Frame = -1

Query: 670   LTAMTIPDLSNXLQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTL 491
             +T+ TIP L+    +P+T P+M    G   +  V  V      + T ++  +  V+  T+
Sbjct: 11110 VTSTTIPILTLSSSEPETTPSMATSHGVEASSAVLTVSPEVPGMVTSLVTSSRAVTSTTI 11169

Query: 490   TEISAALESPVTNPVLVPYLE 428
               ++ + + P T   LV + E
Sbjct: 11170 PTLTISSDEPETTTSLVTHSE 11190


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -1

Query: 670  LTAMTIPDLSNXLQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTL 491
            +T+ TIP L+  L +P+T P+M    G      V  VL     + T ++  +  V+  TL
Sbjct: 2650 VTSTTIPILTFSLGEPETTPSMATSHGTEAGSAVPTVLPEVPGMVTSLVASSRAVTSTTL 2709

Query: 490  TEISAALESPVTNP 449
              ++ +   P T P
Sbjct: 2710 PTLTLSPGEPETTP 2723



 Score = 32.3 bits (70), Expect = 1.7
 Identities = 20/81 (24%), Positives = 38/81 (46%)
 Frame = -1

Query: 670  LTAMTIPDLSNXLQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTL 491
            +T+ TIP L+    +P+T P+M    G   +  V  V      + T ++  +  V+  T+
Sbjct: 2814 VTSTTIPILTLSSSEPETTPSMATSHGVEASSAVLTVSPEVPGMVTFLVTSSRAVTSTTI 2873

Query: 490  TEISAALESPVTNPVLVPYLE 428
              ++ + + P T   LV + E
Sbjct: 2874 PTLTISSDEPETTTSLVTHSE 2894


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,157,685
Number of Sequences: 237096
Number of extensions: 1579104
Number of successful extensions: 3857
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3855
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)