Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p13r
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058600-1|AAL13829.1|  497|Drosophila melanogaster LD29238p pro...    30   3.4  
AF427473-1|AAL18868.1|  497|Drosophila melanogaster dd4 protein ...    30   3.4  
AE013599-63|AAF57339.1|  495|Drosophila melanogaster CG2682-PC, ...    30   3.4  
AE013599-62|AAF57340.2|  497|Drosophila melanogaster CG2682-PA, ...    30   3.4  

>AY058600-1|AAL13829.1|  497|Drosophila melanogaster LD29238p
           protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 347 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 526
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 527 H 529
           H
Sbjct: 171 H 171


>AF427473-1|AAL18868.1|  497|Drosophila melanogaster dd4 protein
           protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 347 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 526
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 527 H 529
           H
Sbjct: 171 H 171


>AE013599-63|AAF57339.1|  495|Drosophila melanogaster CG2682-PC,
           isoform C protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 347 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 526
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 527 H 529
           H
Sbjct: 171 H 171


>AE013599-62|AAF57340.2|  497|Drosophila melanogaster CG2682-PA,
           isoform A protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 347 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 526
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 527 H 529
           H
Sbjct: 171 H 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,558,055
Number of Sequences: 53049
Number of extensions: 486524
Number of successful extensions: 1709
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)