Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p13r
         (691 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g76790.1 68414.m08936 O-methyltransferase family 2 protein si...    29   2.2  
At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE) i...    29   2.9  
At5g04330.1 68418.m00425 cytochrome P450, putative / ferulate-5-...    28   5.1  
At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1) ...    28   5.1  
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic...    27   8.9  
At1g61150.3 68414.m06891 expressed protein similar to Protein C2...    27   8.9  
At1g61150.2 68414.m06889 expressed protein similar to Protein C2...    27   8.9  
At1g61150.1 68414.m06890 expressed protein similar to Protein C2...    27   8.9  

>At1g76790.1 68414.m08936 O-methyltransferase family 2 protein
           similar to caffeic acid O-methyltransferase
           [Catharanthus roseus][GI:18025321], catechol
           O-methyltransferase GB:CAA55358 [Vanilla planifolia]
          Length = 367

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 581 ERLAKVRNHSGFSFRVLQXIRQVGNGHCG 667
           ERL+K+ N +GFS  VL+ I QV +G  G
Sbjct: 173 ERLSKLFNRTGFSVAVLKKILQVYSGFEG 201


>At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE)
           identical to C2H2 zinc-finger protein SERRATE
           GI:14486602 from [Arabidopsis thaliana]
          Length = 720

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 30/98 (30%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
 Frame = -3

Query: 680 PLGPHRNDHSRPV*XSAGP*N*TRYDSLPWPGAQ-RGRHRRPDWTKPGCHSSDYPCYGSL 504
           PL P R D+ R    S  P    R  S P   +  + R+RR D    G   S    YG  
Sbjct: 77  PLPPPRRDYKRRPSLSPPPPYRDRRHSPPQRRSPPQKRYRRDDNGYDGRRGSPRGGYGP- 135

Query: 503 PLDPDRDLXXXXXXXXXXXSGSLPGECPQRDHGRHVRR 390
              PDR              G  PG   +R HGR + R
Sbjct: 136 ---PDRRFGYDHGGGYDREMGGRPGYGDERPHGRFMGR 170


>At5g04330.1 68418.m00425 cytochrome P450, putative /
           ferulate-5-hydroxylase, putative Similar to  Cytochrome
           P450 84A1 Ferulate-5-hydroxylase)(SP:Q42600)[Arabidopsis
           thaliana];
          Length = 512

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 469 ESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICV 365
           E  V N V    L+N   +IMD MF G E  ++ +
Sbjct: 282 EVKVNNSVTKINLDNIKGIIMDVMFGGTETVALAI 316


>At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1)
           (DWF4) identical to gi:2935342
          Length = 513

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 430 ENALNVIMDAMFAGHEVTSICVSI 359
           E  L++I+  +FAGHE +S+ +++
Sbjct: 299 EQILDLILSLLFAGHETSSVAIAL 322


>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
           to gi_11935088_gb_AAG41964
          Length = 209

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 574 VVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVP 437
           +V A + GQS +++P   P    +  T    S A+ SP T P   P
Sbjct: 14  IVVAGVGGQSPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTP 59


>At1g61150.3 68414.m06891 expressed protein similar to Protein
           C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
          Length = 193

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -1

Query: 580 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 425
           +EV  A+LT QS    P +   +++ +W  T++      P  N +    LE+
Sbjct: 139 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 190


>At1g61150.2 68414.m06889 expressed protein similar to Protein
           C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
          Length = 226

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -1

Query: 580 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 425
           +EV  A+LT QS    P +   +++ +W  T++      P  N +    LE+
Sbjct: 172 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 223


>At1g61150.1 68414.m06890 expressed protein similar to Protein
           C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
          Length = 193

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -1

Query: 580 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 425
           +EV  A+LT QS    P +   +++ +W  T++      P  N +    LE+
Sbjct: 139 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 190


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,788,688
Number of Sequences: 28952
Number of extensions: 218049
Number of successful extensions: 604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)