Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p13f
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    22   3.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 367 QVATPVIIPAMEVSLWTLTEISAALESPVTN 459
           Q ATP   P    S W+  +    + SP  N
Sbjct: 292 QQATPYSAPGPTYSTWSTVQTPTTVMSPTIN 322


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 253 TIPDLSNALQDPKTEPA 303
           T  DL ++ Q P+T+PA
Sbjct: 72  TSQDLQHSYQSPQTQPA 88



 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 61  SVAFGYQTTWTVHELSNAIQSPYT 132
           ++AFG    +T+H   +   +P+T
Sbjct: 477 NIAFGDAVLYTIHMGYHGFHNPFT 500


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = +3

Query: 324  GAQRGRHRRPDW-TKP 368
            GA    H  PDW TKP
Sbjct: 1024 GASSTEHMHPDWTTKP 1039


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 222 NGYSFNLFSCVKSSHHLVES 163
           NGY     + + S+HHL +S
Sbjct: 63  NGYGLPGHTIIASNHHLAKS 82


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 187 LHAGEKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPA 303
           LH     EA P+T  A  L+   I  L N  Q+ KT+ A
Sbjct: 318 LHISGPAEAGPLTKDAGLLSYPEICTLLNDPQNAKTQKA 356


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 309 NHSGFSFRVLQSIRQVGNGHC 247
           NH   S+ VLQS++ +    C
Sbjct: 316 NHGKISYNVLQSMKYLDQVVC 336


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 10  LENRSRMKFITVFAAILSV 66
           ++NR + K  T+FA +LSV
Sbjct: 492 VDNRRKPKPGTIFAKLLSV 510


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,183
Number of Sequences: 336
Number of extensions: 2741
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)