Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p13f
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    30   1.7  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    30   1.7  
AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-P...    29   5.1  
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC...    28   6.7  
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD...    28   6.7  
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB...    28   6.7  
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA...    28   6.7  

>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 441 KSSRDLGQGPEGDFHSRD-NHWSGNLALSSQDGGDDLVERLAKVRNHSGFSFRVLQSIRQ 265
           K+S  LGQG  G+  S + +  SG      Q GG     R     N  G   R + S   
Sbjct: 274 KNSDILGQGLGGNSDSYNGSSSSGRYQQQDQQGGSHRGSRSNYHSNSDGSYNRSINS-NS 332

Query: 264 VGNGHCGEVQSGNG 223
           VG G  G V SG+G
Sbjct: 333 VGGGGSGAVGSGSG 346


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 441 KSSRDLGQGPEGDFHSRD-NHWSGNLALSSQDGGDDLVERLAKVRNHSGFSFRVLQSIRQ 265
           K+S  LGQG  G+  S + +  SG      Q GG     R     N  G   R + S   
Sbjct: 274 KNSDILGQGLGGNSDSYNGSSSSGRYQQQDQQGGSHRGSRSNYHSNSDGSYNRSINS-NS 332

Query: 264 VGNGHCGEVQSGNG 223
           VG G  G V SG+G
Sbjct: 333 VGGGGSGAVGSGSG 346


>AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-PA
           protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  VAFGYQTTWTVHELSNAIQSPYTSAAVLPYLETAL 168
           +AF +   W V    NA++S Y +   L Y+E++L
Sbjct: 180 LAFAWCAIWFVFAADNAVESRYITQEELHYIESSL 214


>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
           isoform C protein.
          Length = 1573

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
           isoform D protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
           isoform B protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
           isoform A protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,429,888
Number of Sequences: 53049
Number of extensions: 582741
Number of successful extensions: 1999
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)