Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p13f
(522 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 30 1.1
At1g76790.1 68414.m08936 O-methyltransferase family 2 protein si... 30 1.1
At1g09710.1 68414.m01090 myb family transcription factor contain... 29 1.4
At1g17520.1 68414.m02153 DNA-binding protein, putative contains ... 29 2.5
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t... 28 4.4
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t... 28 4.4
At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein si... 28 4.4
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 27 5.8
At1g61150.3 68414.m06891 expressed protein similar to Protein C2... 27 5.8
At1g61150.2 68414.m06889 expressed protein similar to Protein C2... 27 5.8
At1g61150.1 68414.m06890 expressed protein similar to Protein C2... 27 5.8
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 27 7.7
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 29.9 bits (64), Expect = 1.1
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 223 TIPALDLTAMTIPDLSNALQDPKTEP---AMIPYLGQALNEVVTAVLTGQSQVAT-PVII 390
T PA+ T T+P L L++ T P A P L +L V T S A P +
Sbjct: 89 TAPAISPTTATLPPLLPILKENATAPTANAKAPGLNPSL---VKDHATAPSPSANPPAAL 145
Query: 391 PAMEVSL--WTLTEISAALESPVTNPVLVP 474
P + SL T + +++SPV P+L P
Sbjct: 146 PGLNPSLVKENATAPAPSVKSPVALPILNP 175
>At1g76790.1 68414.m08936 O-methyltransferase family 2 protein
similar to caffeic acid O-methyltransferase
[Catharanthus roseus][GI:18025321], catechol
O-methyltransferase GB:CAA55358 [Vanilla planifolia]
Length = 367
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 330 ERLAKVRNHSGFSFRVLQSIRQVGNGHCG 244
ERL+K+ N +GFS VL+ I QV +G G
Sbjct: 173 ERLSKLFNRTGFSVAVLKKILQVYSGFEG 201
>At1g09710.1 68414.m01090 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 689
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 214 VPVTIPALDLTAMTIPDLSNALQDPKTEP--AMIPYLGQALNEVVTAVLTGQSQVATPVI 387
VP T P + + +P S +L PK EP ++ + N + V+ S P+I
Sbjct: 467 VPKTKPVKHASTVCMPQPSGSLSMPKVEPGTSVAASIRSLANGKLKPVMASSSSNKPPLI 526
Query: 388 IPAMEVSLWTLTEISAALES 447
P E S ++ SA L S
Sbjct: 527 APRSEGS--SMLSASAPLAS 544
>At1g17520.1 68414.m02153 DNA-binding protein, putative contains
similarity to DNA-binding protein PcMYB1 [Petroselinum
crispum] gi|2224899|gb|AAB61699
Length = 296
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 115 IQSPYTSAAVLPYLETALNQMMAALHAGEKIEAVPVTIPALDLTAMTIPDLSNALQDPKT 294
I++P AA A ++ H+G T+P + ++I D N + DPK
Sbjct: 69 IRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVA--TLPRSGSSDLSIDDSFNIVVDPKN 126
Query: 295 EPAMIPYLGQALNEVVTA 348
P + +AL+ + A
Sbjct: 127 APRYDGMIFEALSNLTDA 144
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -1
Query: 360 SSQDGGDDLV---ERLAKVRN-HSGFSFRVLQSIRQVGNGHCGEVQSGNGNGYSF 208
SS D D+ ER+ + RN + V++++ G EV+SGNG +SF
Sbjct: 305 SSADDDDETKTDSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSF 359
>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 202 KIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATP 381
K+ PVT+P L + +T+P L P T P +P + ++ +T P
Sbjct: 45 KLPVPPVTVPKLPVPPVTVPKLP---VPPVTVP-KLPVPPVTIPKLPVPPVTVPKLPVPP 100
Query: 382 VIIPAMEVSLWTLTEISAALESPVTNPVL 468
V +P + V T+ ++ PVT P L
Sbjct: 101 VTVPKLPVPPVTVPKLPV---PPVTVPKL 126
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +1
Query: 202 KIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATP 381
K+ PVT+P L + +TIP L P T P +P + ++ +T P
Sbjct: 65 KLPVPPVTVPKLPVPPVTIPKLP---VPPVTVP-KLPVPPVTVPKLPVPPVTVPKLPVPP 120
Query: 382 VIIPAMEVSLWTLTEISAALESPVTNPVL 468
V +P + V T+ ++ PVT P L
Sbjct: 121 VTVPKLPVPPVTVPKLPV---PPVTVPKL 146
>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 202 KIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATP 381
K+ PVT+P L + +T+P L P T P +P + ++ +T P
Sbjct: 45 KLPVPPVTVPKLPVPPVTVPKLP---VPPVTVP-KLPVPPVTIPKLPVPPVTVPKLPVPP 100
Query: 382 VIIPAMEVSLWTLTEISAALESPVTNPVL 468
V +P + V T+ ++ PVT P L
Sbjct: 101 VTVPKLPVPPVTVPKLPV---PPVTVPKL 126
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +1
Query: 202 KIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATP 381
K+ PVT+P L + +TIP L P T P +P + ++ +T P
Sbjct: 65 KLPVPPVTVPKLPVPPVTIPKLP---VPPVTVP-KLPVPPVTVPKLPVPPVTVPKLPVPP 120
Query: 382 VIIPAMEVSLWTLTEISAALESPVTNPVL 468
V +P + V T+ ++ PVT P L
Sbjct: 121 VTVPKLPVPPVTVPKLPV---PPVTVPKL 146
>At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase precursor GI:4097948 from
[Oryza sativa]
Length = 426
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 226 IPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVAT 378
+PA ++T +TI + AL D ++P + + ++TA L+ Q V T
Sbjct: 108 LPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTT 158
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 337 VVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVP 474
+V A + GQS +++P P + T S A+ SP T P P
Sbjct: 14 IVVAGVGGQSPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTP 59
>At1g61150.3 68414.m06891 expressed protein similar to Protein
C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
Length = 193
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 331 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 486
+EV A+LT QS P + +++ +W T++ P N + LE+
Sbjct: 139 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 190
>At1g61150.2 68414.m06889 expressed protein similar to Protein
C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
Length = 226
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 331 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 486
+EV A+LT QS P + +++ +W T++ P N + LE+
Sbjct: 172 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 223
>At1g61150.1 68414.m06890 expressed protein similar to Protein
C20orf11 (Swiss-Prot:Q9NWU2) [Homo sapiens]
Length = 193
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 331 NEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPVLVPYLEN 486
+EV A+LT QS P + +++ +W T++ P N + LE+
Sbjct: 139 SEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 190
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 303 YDSLPWPGAQRGRHRRPDWTKPGCHSSDYPCYGSLPLDP 419
+ + P PG G P PG H YP Y SLP P
Sbjct: 31 FSTTPRPGMSAG----PAQMNPGIHPHMYPPYHSLPGTP 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.129 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,638,270
Number of Sequences: 28952
Number of extensions: 260665
Number of successful extensions: 849
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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