Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p12r
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   8.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   8.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/50 (22%), Positives = 25/50 (50%)
 Frame = -3

Query: 649 LPSRPGKWGKPRTRLSGSLVAASASTTSILRPETRAAEDSPTTYKSGDDK 500
           LP+  GKW   ++    S+ ++       +  +T   ++SP+ + S D++
Sbjct: 363 LPNCCGKWSSQKSEPRRSIYSSLLRYPRSIFRQTDDHQNSPSIFISDDNQ 412


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 447 CVNETTNRISRSKI 406
           CV+  +NRISR+++
Sbjct: 32  CVSRISNRISRNRV 45


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = -1

Query: 204 TLEFTMTMSIWYM*TWHTKYEISNARNAPHYTLT*PN 94
           T E+ +    W    W       NA++    T+T PN
Sbjct: 104 TSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPN 140


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   SFNNENYLLLKNVNDKQNILFFAHYII 85
           ++NN N     N N+    L++ +YII
Sbjct: 326 NYNNYNNYNNNNYNNYNKKLYYKNYII 352


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 340 NICIYVTVKVDIAANVHIF 284
           N+CI   VKV  AA+  +F
Sbjct: 166 NVCIAAAVKVPSAADDRMF 184


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 185 PCRFGICEHGIQNMKSLMREMRLTT 111
           P +  +CE   ++   L R MR+ T
Sbjct: 147 PYKCDVCERAFEHSGKLHRHMRIHT 171


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 340 NICIYVTVKVDIAANVHIF 284
           N+CI   VKV  AA+  +F
Sbjct: 256 NVCIAAAVKVPSAADDRMF 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,966
Number of Sequences: 438
Number of extensions: 5119
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)