Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p12f
(543 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.1
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 24 3.7
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 24 3.7
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 4.9
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical prote... 23 6.5
AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory a... 23 6.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 6.5
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 2.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 219 AVSLPQDRYGRRRSHICHHGPGSGANPEPDYPGRWWRHRLQQ 344
A + Q++ R S H GPG+ A P P HRL+Q
Sbjct: 890 AAAASQEQQQRSSSSQQHRGPGAAAATGPPPP----THRLEQ 927
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 23.8 bits (49), Expect = 3.7
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 362 ETRAAEDSPT-TYKSGDDKYVFTLQLLVE 445
E+ AA +S T T+K GD K T+ LLV+
Sbjct: 36 ESTAAPESLTETWKEGDAKARATIALLVD 64
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.8 bits (49), Expect = 3.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 203 QRRLVRSLTSTGSLWPPAFAYLPSR 277
QRRL L STG L P + + R
Sbjct: 508 QRRLTTHLESTGGLSDPQYGFRKGR 532
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 338 KPMPPPATRIVGFWVCPTS 282
+P PPP T W PT+
Sbjct: 243 QPPPPPTTTTTTVWTDPTT 261
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 244 PPPPPTTTTTTVWTDPTT 261
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 244 PPPPPTTTTTTVWTDPTT 261
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 243 PPPPPTTTTTTVWTDPTT 260
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 243 PPPPPTTTTTTVWTDPTT 260
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 244 PPPPPTTTTTTVWTDPTT 261
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 244 PPPPPTTTTTTVWTDPTT 261
>AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical protein
protein.
Length = 126
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 52 MKFTLLFVLVIVTAVAADEEAGVRSNG 132
MKF ++ L +V AVAA ++ + +G
Sbjct: 1 MKFFVVVALALVAAVAAQDKYTTKYDG 27
>AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory
appendage protein SAP-3 protein.
Length = 126
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 52 MKFTLLFVLVIVTAVAADEEAGVRSNG 132
MKF ++ L +V AVAA ++ + +G
Sbjct: 1 MKFFVVVALALVAAVAAQDKYTTKYDG 27
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.0 bits (47), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 335 PMPPPATRIVGFWVCPTS 282
P PPP T W PT+
Sbjct: 244 PPPPPTTTTTTVWTDPTT 261
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,938
Number of Sequences: 2352
Number of extensions: 11671
Number of successful extensions: 67
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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