Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p12f
         (543 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY305861-1|AAP74384.1|  194|Homo sapiens ladybird-like homeodoma...    31   2.6  
BC018142-1|AAH18142.1|  740|Homo sapiens CARD14 protein protein.       31   3.4  
BC001326-1|AAH01326.1|  434|Homo sapiens caspase recruitment dom...    31   3.4  
AY032927-1|AAK54453.1| 1004|Homo sapiens CARD-containing MAGUK 2...    31   3.4  
AF322642-1|AAG53403.1| 1004|Homo sapiens caspase recruitment dom...    31   3.4  
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag...    30   4.6  

>AY305861-1|AAP74384.1|  194|Homo sapiens ladybird-like homeodomain
           protein 2 protein.
          Length = 194

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +2

Query: 245 WPPAFAYLPSRPGKWGKPRTRLSGSLVAASASTTSILRPETRAAEDS----PTTYKSGDD 412
           +PP  A  P+RPG W   R  L     + + + +   RP+ RA  D+    P   K    
Sbjct: 26  FPPLAASRPARPGGWRWARRDLC-KTASRAENNSQACRPQRRAGPDALGPGPFGRKRRKS 84

Query: 413 KYVFTLQLLVE 445
           +  FT Q ++E
Sbjct: 85  RTAFTAQQVLE 95


>BC018142-1|AAH18142.1|  740|Homo sapiens CARD14 protein protein.
          Length = 740

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 160 TSQDSLIRSFRFNRPASPSSQSHFHRIA 243
           TS   L+ SFR + PA PS QS + R+A
Sbjct: 462 TSSRELVDSFRSSSPAPPSQQSLYKRVA 489


>BC001326-1|AAH01326.1|  434|Homo sapiens caspase recruitment domain
           family, member 14 protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 160 TSQDSLIRSFRFNRPASPSSQSHFHRIA 243
           TS   L+ SFR + PA PS QS + R+A
Sbjct: 225 TSSRELVDSFRSSSPAPPSQQSLYKRVA 252


>AY032927-1|AAK54453.1| 1004|Homo sapiens CARD-containing MAGUK 2
           protein protein.
          Length = 1004

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 160 TSQDSLIRSFRFNRPASPSSQSHFHRIA 243
           TS   L+ SFR + PA PS QS + R+A
Sbjct: 462 TSSRELVDSFRSSSPAPPSQQSLYKRVA 489


>AF322642-1|AAG53403.1| 1004|Homo sapiens caspase recruitment domain
           protein 14 protein.
          Length = 1004

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 160 TSQDSLIRSFRFNRPASPSSQSHFHRIA 243
           TS   L+ SFR + PA PS QS + R+A
Sbjct: 462 TSSRELVDSFRSSSPAPPSQQSLYKRVA 489


>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
           precursor variant protein.
          Length = 1463

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -1

Query: 387 GESSAARVSGLKIDVVEADAATSDPDSRVLGLPHFPGRDGR 265
           GES A   SGL     E        D  + G+P  PGRDGR
Sbjct: 271 GESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGR 311


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,296,344
Number of Sequences: 237096
Number of extensions: 1871536
Number of successful extensions: 5558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5551
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)