BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11p12f (543 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.2 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.2 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.2 DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 2.7 AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 2.7 DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 3.5 DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 3.5 AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 3.5 DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 4.6 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.6 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 23.8 bits (49), Expect = 1.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184 + G S E RLR RR W I+ +R Sbjct: 23 SETGLRSRTQEERLRRRREWMIQQER 48 >DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6 protein. Length = 125 Score = 22.6 bits (46), Expect = 2.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 58 FTLLFVLVIVTAVAADE 108 + LLFVLV +T V A++ Sbjct: 4 YILLFVLVTITCVIAED 20 >AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein protein. Length = 125 Score = 22.6 bits (46), Expect = 2.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 58 FTLLFVLVIVTAVAADE 108 + LLFVLV +T V A++ Sbjct: 4 YILLFVLVTITCVIAED 20 >DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 22.2 bits (45), Expect = 3.5 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -1 Query: 150 NHQVRSTVRSHA 115 NH RST RSHA Sbjct: 259 NHNERSTPRSHA 270 >DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 22.2 bits (45), Expect = 3.5 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -1 Query: 150 NHQVRSTVRSHA 115 NH RST RSHA Sbjct: 259 NHNERSTPRSHA 270 >AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled receptor protein. Length = 399 Score = 22.2 bits (45), Expect = 3.5 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -1 Query: 150 NHQVRSTVRSHA 115 NH RST RSHA Sbjct: 259 NHNERSTPRSHA 270 >DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor 2 protein. Length = 581 Score = 21.8 bits (44), Expect = 4.6 Identities = 11/50 (22%), Positives = 25/50 (50%) Frame = +2 Query: 266 LPSRPGKWGKPRTRLSGSLVAASASTTSILRPETRAAEDSPTTYKSGDDK 415 LP+ GKW ++ S+ ++ + +T ++SP+ + S D++ Sbjct: 363 LPNCCGKWSSQKSEPRRSIYSSLLRYPRSIFRQTDDHQNSPSIFISDDNQ 412 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 21.8 bits (44), Expect = 4.6 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = +3 Query: 468 CVNETTNRISRSKI 509 CV+ +NRISR+++ Sbjct: 32 CVSRISNRISRNRV 45 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 158,457 Number of Sequences: 438 Number of extensions: 3477 Number of successful extensions: 18 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15459066 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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