Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p11f
         (542 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    28   9.5  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    28   9.5  

>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 288 DPRTRTALTRLPAGAVNLTLRTRQLIVAARLTTKLRKSLSLEVILPILKALALSV 124
           D + R       A  ++  L   +L + A+LTT+LRK L+ EV   + K LA  V
Sbjct: 132 DEKWREDFKEEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAEEV 186


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 288 DPRTRTALTRLPAGAVNLTLRTRQLIVAARLTTKLRKSLSLEVILPILKALALSV 124
           D + R       A  ++  L   +L + A+LTT+LRK L+ EV   + K LA  V
Sbjct: 132 DEKWREDFKEEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAEEV 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,423,486
Number of Sequences: 53049
Number of extensions: 399271
Number of successful extensions: 1187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)