Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p10r
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 35 0.078
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 32 0.42
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 32 0.42
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 31 0.73
SB_15799| Best HMM Match : PH (HMM E-Value=0.76) 31 0.73
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 31 0.73
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 31 0.96
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 1.7
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 30 2.2
SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8) 29 2.9
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 29 3.9
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 29 5.1
SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_58132| Best HMM Match : DGPF (HMM E-Value=8.7) 28 6.8
SB_52774| Best HMM Match : rve (HMM E-Value=2e-17) 28 6.8
SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3) 28 6.8
SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46) 28 6.8
SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 6.8
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 28 6.8
SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 28 6.8
SB_22261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_20593| Best HMM Match : RnaseH (HMM E-Value=1.9) 28 6.8
SB_17261| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 6.8
SB_15802| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 6.8
SB_9953| Best HMM Match : VWA (HMM E-Value=0) 28 6.8
SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 28 6.8
SB_46683| Best HMM Match : F5_F8_type_C (HMM E-Value=9.6e-12) 28 6.8
SB_46069| Best HMM Match : NOPS (HMM E-Value=2) 28 6.8
SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17) 28 6.8
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 28 6.8
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 28 6.8
SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 6.8
SB_22926| Best HMM Match : DGPF (HMM E-Value=8) 28 6.8
SB_21805| Best HMM Match : Upf2 (HMM E-Value=4) 28 6.8
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 28 6.8
SB_14016| Best HMM Match : rve (HMM E-Value=0.0027) 28 6.8
SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019) 28 6.8
SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21) 28 6.8
SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_619| Best HMM Match : rve (HMM E-Value=0.027) 28 6.8
SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 28 9.0
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 28 9.0
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 28 9.0
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 9.0
>SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 132 bits (320), Expect = 2e-31
Identities = 88/250 (35%), Positives = 129/250 (51%), Gaps = 14/250 (5%)
Frame = -3
Query: 710 NRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXX 531
++ RKL D+E E G+DY LDL++ + ++E+ DVIPEI+ G NIADYIDPDI
Sbjct: 308 SKTRKLAVDVERELGEDYYLDLRQQWDLKNKEEKGDVIPEIFLGKNIADYIDPDIMKKLE 367
Query: 530 XXXXXXXXXXAGGMY-AAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMP 354
A G+Y + + ELD EI+ A +IR K+ ++ + R K + +P++P
Sbjct: 368 ELEKEEELREAAGVYESESEEELDSEGEEIKNKAAEIREKRKLIVKQHRESKGTNRPIIP 427
Query: 353 RTSRAKTK----QRSTSKLRKDMEKLGVDMSE----TGDAHFTXXXXXXXXXXXXXXXXX 198
R + AK + +RS + D +K+ +D + TG
Sbjct: 428 RKALAKAETARNKRSAGVIDSD-KKMDIDEDQDEPMTGRKRSRSQTPANAKRRRSNTASV 486
Query: 197 XXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFAG 33
R S P +++P + K K +A + +K +MG GEADR I TKMPKHLF+G
Sbjct: 487 TPRSQSRVPRDQSGLSNPEKKQKAKTLA-KTVQRKMNRMGKAGEADRMIRTKMPKHLFSG 545
Query: 32 KRGVGKTDRR 3
KR GKT RR
Sbjct: 546 KRKGGKTSRR 555
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 34.7 bits (76), Expect = 0.078
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDESRLVK-QSTKPVMPRTSRAKTKQRSTSKLRKDME 294
EL+DT R++ +Q+ N+K K ES+ VK + P +PR++ A + +LR++++
Sbjct: 252 ELEDTKRQLSHQIQQLINEKNKRK-ESKFVKPKQQTPEVPRSTPAYERDDELERLRREVQ 310
Query: 293 KLGVDM 276
+ +++
Sbjct: 311 RYRLEI 316
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRK 303
+LD VRE +EL R +R KAI D +++V+++T + + + + ++ L K
Sbjct: 450 DLDHEVREKQELIRCMREVKAIEADMAQMVQENTSKFVDKLKKKELTEKEREGLLK 505
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 452 REIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
RE L R++RN + L D + KQS+ + T +T + S L D++K
Sbjct: 314 REKNALQRELRNVREKLMDVENVHKQSSNALESATGEMQTARDKLSLLEFDLQKANKQKQ 373
Query: 272 ETGD 261
G+
Sbjct: 374 SVGE 377
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 452 REIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
RE L R++RN + L D + KQS+ + T +T + S L D++K
Sbjct: 2842 REKNALQRELRNVREKLMDVENVHKQSSNALESATGEMQTARDKLSLLEFDLQKANKQKQ 2901
Query: 272 ETGD 261
G+
Sbjct: 2902 SVGE 2905
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 477 QDRAGRHREGDQGTGPADTQQEGHSQGRVSPGEAVHEAG 361
Q R G +G++ GP+ Q +G+ +P AVH AG
Sbjct: 464 QGRVGPKMDGNKHQGPSPLPQASADRGQTTPVNAVHPAG 502
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ RN K L E L+ +S + V+PR+ RA+
Sbjct: 915 QVDELAREYRNYKEELSVEDGLLFKSDRIVVPRSMRAE 952
>SB_15799| Best HMM Match : PH (HMM E-Value=0.76)
Length = 836
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 665 DDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIF 543
DD D K E+ E+E D +PE+ +++Y D DIF
Sbjct: 491 DDSSTDPVKENVEVEEEEFQDALPELSPPSRLSNYEDIDIF 531
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 665 DDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIF 543
DD D K E+ E+E D +PE+ +++Y D DIF
Sbjct: 365 DDSSTDPVKENVEVEEEEFQDALPELSPPSRLSNYEDIDIF 405
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = -2
Query: 459 HREGDQGTGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAEVHLQA---QEGHGET 289
H E ++G P E +G PG+ + E AH QD E A ++ H E
Sbjct: 322 HEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAHPPEQHHEEE 381
Query: 288 WRG 280
RG
Sbjct: 382 ERG 384
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = -2
Query: 495 RHVRRAQDRAGRHREGDQ-GTGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAEVH 319
R + D G+H E ++ G P + E +G PGE E AH QD E
Sbjct: 295 RERKEEADPPGQHHEEEERGVHPPEQHHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEE 354
Query: 318 LQAQ---EGHGETWRG 280
A + H E RG
Sbjct: 355 RGAHPPGQDHEEEERG 370
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/72 (20%), Positives = 33/72 (45%)
Frame = -3
Query: 476 KIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDM 297
K ++D+T RE++E + ++ K +++ V ++ K V + S++ D+
Sbjct: 224 KTKVDETKREVQETKKDVQETKKEVQETKTKVDETNKEVQETKKEVHEVKGKVSEMAVDV 283
Query: 296 EKLGVDMSETGD 261
L + S D
Sbjct: 284 ASLKEEFSTVQD 295
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDESRLVK-QSTKPVMPRTSRAKTKQRSTSK 312
EL+DT R++ +Q+ N+K K ES+ VK + P +PR++ A Q +K
Sbjct: 252 ELEDTKRQLSHQIQQLINEKNKRK-ESKFVKPKQQTPEVPRSTPAYEAQMKNAK 304
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -3
Query: 473 IELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDME 294
+ L D +R + ++ N+K LKD +++++ + + R SR+ RS K ++E
Sbjct: 112 VRLTDEIRGYADAEERLHNEKNDLKDAVGVLRKTLEGIERRLSRSGRSFRSLEKELTELE 171
Query: 293 KL 288
++
Sbjct: 172 EV 173
>SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8)
Length = 645
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = -2
Query: 459 HREGDQGTGPADTQQEGHSQGRVSP-----GEAVHEAGDAAHLASQDQAEVHLQAQ 307
HR+G+ G + GH QG V P + H G+ A LAS H Q +
Sbjct: 173 HRQGNVGPLAIPSPNSGHRQGNVGPLAIPNPNSGHRQGNVAPLASPSPNSGHQQGK 228
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = -2
Query: 459 HREGDQGTGPADTQQEGHSQGRVSP-----GEAVHEAGDAAHLASQDQAEVHLQAQEG 301
HR+G+ + + GH QG V+P + H G+ A LA H Q G
Sbjct: 122 HRQGNVAQLALPSPKSGHRQGNVAPLALPSPNSGHRQGNVAQLALPSPKSGHRQGNVG 179
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = -2
Query: 459 HREGDQGTGPADTQQEGHSQGRVS----PG-EAVHEAGDAAHLASQDQAEVHLQAQ 307
HR+G+ + + GH QG+VS P + H G+ A LAS H Q +
Sbjct: 207 HRQGNVAPLASPSPNSGHQQGKVSQLALPSPNSGHRQGNVAPLASPSPNSGHQQGK 262
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKL 309
E DT++++ + Q +A+LK+ ++V KP P A + S+SKL
Sbjct: 307 ERSDTLQKLEKEVLQNGKLQAVLKELQQIVNTPIKPFTPSPGVATSGSVSSSKL 360
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 404 LKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
LK +KQ+ K + +RA+ K TSK K + K +D+S
Sbjct: 227 LKGVLEKIKQARKASKKKRARARKKHNKTSKKSKHVSKKPLDIS 270
>SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -2
Query: 171 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPVHRHQDAEASVR 37
GGR +E DG RG ++E EDG GRG D E R
Sbjct: 270 GGRGDK-KEHMADGGRGDKKEHMEDG--GRGDKKEHMADGERGDR 311
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDESRLVKQ--STKPVMPRTSRAKTKQRSTSKLRKDM 297
+LD+ +++++ A+ NK+ KDES K+ +TK + +AK + S S + +
Sbjct: 232 DLDEDLKDVQTPAKSAPNKEDKSKDESTEEKEESATKAEVDDNKKAKADKASISIISDEK 291
Query: 296 EK 291
E+
Sbjct: 292 EE 293
>SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3
Query: 452 REIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLR 306
R++R +RQ+R K ++ ESR V+ ++ V + + + + R + LR
Sbjct: 468 RQVRVESRQVRVKSRQVRVESRQVRVKSRQVRVESRQVRVESRLSRHLR 516
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 443 RELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTK 330
++ ARQ R K + +D+ + KQ+ +P R + KTK
Sbjct: 405 KKAARQARRKTSTPQDQDKQDKQAARPRQARQASRKTK 442
>SB_58132| Best HMM Match : DGPF (HMM E-Value=8.7)
Length = 161
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_52774| Best HMM Match : rve (HMM E-Value=2e-17)
Length = 329
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 363 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 400
>SB_40452| Best HMM Match : Upf2 (HMM E-Value=4.3)
Length = 245
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46)
Length = 189
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -3
Query: 494 GMYAAPKIELDDTVREIRELARQIRNKKA---ILKDESRLVKQSTKPVMPRTSRAKTKQR 324
G+Y A + EL+D +++ +++++ KA + +E+ +K + + R S + Q
Sbjct: 49 GIYKAQQDELEDAEKQLASTRKKLQDMKASYEAVNEENEKLKNDLESIKRRISEMEGVQE 108
Query: 323 STSKLRKD 300
S + + D
Sbjct: 109 SVTVVEVD 116
>SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 1183
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 769 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 806
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 28.3 bits (60), Expect = 6.8
Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 2/123 (1%)
Frame = -2
Query: 405 SQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQEGHGETWRGHVGDXXXXXXXXXXXXXX 226
S+ + GEA EAG+A+ + +A +A E GE V
Sbjct: 688 SEASEAAGEATGEAGEASEASEAGEASEAGEAGEA-GEASEAGVAGEAVEGSEASKAGEA 746
Query: 225 XXXXXXXXXXXAGTLQPAG--GRPHHARESKEDGARGHRQEDQEDGPQGRGGPVHRHQDA 52
AG AG G+ A E+ E G E E+G G +D
Sbjct: 747 GEAVEAGEASEAGEASEAGEAGKAGEASEAGEASEVGEASEAGENGVASEAG-----EDG 801
Query: 51 EAS 43
EAS
Sbjct: 802 EAS 804
>SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1197
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 783 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 820
>SB_22261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 14 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 51
>SB_20593| Best HMM Match : RnaseH (HMM E-Value=1.9)
Length = 341
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 304 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 341
>SB_17261| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 356
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_15802| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 481
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_9953| Best HMM Match : VWA (HMM E-Value=0)
Length = 1034
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 806 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 843
>SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 590 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 627
>SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1336
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 867 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 904
>SB_46683| Best HMM Match : F5_F8_type_C (HMM E-Value=9.6e-12)
Length = 495
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -2
Query: 180 QPAGGRPHHARESKEDGARGHRQEDQEDG--PQGRGGPVHRHQDAEASVR 37
Q AGG ARE ++ G G R + +G P R G H EA R
Sbjct: 264 QDAGGTRARAREEQDTGRGGGRATETTEGTAPHVREGEDEVHTAGEAGFR 313
>SB_46069| Best HMM Match : NOPS (HMM E-Value=2)
Length = 278
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17)
Length = 414
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 14 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 51
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 488 TCRQPRAVPRPSPTLPVYQRCPGRYS 565
TC QP A P+P+P P RYS
Sbjct: 488 TCTQPSAKPKPAPRPPSVSLARRRYS 513
>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
Length = 1021
Score = 28.3 bits (60), Expect = 6.8
Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Frame = -2
Query: 459 HREGDQGTGPADTQQEGHSQGRVSPGEAV--HEAGDAAHLASQDQAEVHLQAQEGHGETW 286
H +GD G + GH +G + G+ HE GD H ++ H + HG+
Sbjct: 291 HEKGDMQHGKKNM---GHEEGDMQHGKKNMGHERGDMQH-GKKNMG--HEKGDMQHGKKN 344
Query: 285 RGHV-GDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRPHHARESKEDGAR--GHR 115
GH GD G +Q H + + G + GH
Sbjct: 345 MGHEKGDMQHGKKNMEHEEGDMQHGKKNMGHEEGDMQQGKKSMEHEKGDMQHGKKNMGHE 404
Query: 114 QEDQEDGPQGRG---GPVHR------HQDAEASVRWKTWGRQDG 10
+ D + G + G G + H++ + R K G ++G
Sbjct: 405 EGDMQHGKKNMGHEEGDMQHGKKNMEHEEGDMQHRKKNMGHEEG 448
>SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 327
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 14 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 51
>SB_22926| Best HMM Match : DGPF (HMM E-Value=8)
Length = 203
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 14 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 51
>SB_21805| Best HMM Match : Upf2 (HMM E-Value=4)
Length = 227
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = -3
Query: 470 ELDDTVREIRELARQIRNKKAILKDE---SRLVKQSTKPVMPRTSRAKTKQRST----SK 312
EL+D +EI L +++ + A LK+E S +K + + + + +Q+ +
Sbjct: 111 ELEDKTQEILNLQQELNDVNASLKEERWYSTALKDEVEKLNNQNKALQDQQKQVEQEKEQ 170
Query: 311 LRKDMEKLGVDMSE 270
+RKD EK ++ E
Sbjct: 171 MRKDFEKRLIEEKE 184
>SB_14016| Best HMM Match : rve (HMM E-Value=0.0027)
Length = 430
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019)
Length = 1234
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 538 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 575
>SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 428
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 14 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 51
>SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 502 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 539
>SB_619| Best HMM Match : rve (HMM E-Value=0.027)
Length = 290
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
++ ELAR+ N K L E L+ +S + V+PR+ RA+
Sbjct: 89 QVDELAREYWNYKEELSVEDGLLFKSDRIVVPRSMRAE 126
>SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 102 EDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 10
ED GG HR +D EAS+ K +DG
Sbjct: 417 EDDDDVNGGDYHRVEDDEASITIKQTNAEDG 447
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 132 GARGHRQEDQEDGPQGRGGP 73
GA+G R +D +DG QG GP
Sbjct: 837 GAKGARGDDGKDGKQGPAGP 856
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAK 336
+I ELAR+ N + L E L+ +S + V+PR RAK
Sbjct: 847 QIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAK 884
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -2
Query: 180 QPAGGRPHHARESKEDGARGHRQEDQ--EDG 94
+PA GRP H++E KE R+ D+ EDG
Sbjct: 189 RPAHGRPGHSKERKEGEKDKGRKSDEKSEDG 219
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 716 KENRKRKLERDIEVEXGDDYVLDLKKNYTEIPE 618
K+ KR + +IE++ D Y L+ NYTE PE
Sbjct: 317 KDGNKRWVCSNIELDMPDTYKLETNSNYTE-PE 348
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 441 PDLPHGVVQLDLGRGVHAASLAQFLVLLQLCQFIKD-VR-VDIVGDVVSL 584
PDL H V D GRGVH+ L L ++ C F VR +D+V VSL
Sbjct: 24 PDLHH-VTSKDCGRGVHSDGLETPLT-IKNCVFAGSMVRGIDVVSGHVSL 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,342,793
Number of Sequences: 59808
Number of extensions: 325553
Number of successful extensions: 1731
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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