Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p10r
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 155 2e-37
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 154 3e-37
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 154 3e-37
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 154 3e-37
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 154 3e-37
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 154 3e-37
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 153 6e-37
AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding prot... 81 8e-21
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 33 0.80
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 32 2.4
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 32 2.4
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 5.6
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 31 5.6
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 31 5.6
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 5.6
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.6
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.6
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.6
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 5.6
AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase... 31 5.6
AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase... 31 5.6
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 5.6
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 5.6
BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein. 30 7.4
AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepi... 30 7.4
AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein. 30 7.4
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 30 9.8
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 30 9.8
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 30 9.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 9.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 9.8
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 30 9.8
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 30 9.8
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 30 9.8
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 30 9.8
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 30 9.8
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 30 9.8
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 30 9.8
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 30 9.8
AF286472-1|AAG00551.1| 567|Homo sapiens retinitis pigmentosa GT... 30 9.8
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 30 9.8
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 155 bits (376), Expect = 2e-37
Identities = 102/255 (40%), Positives = 130/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 386 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 445
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 446 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 504
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 505 GPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 560
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M +A KK ++G KGEADR + PK
Sbjct: 561 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMKNA--QKKMNRLGKKGEADRHVFDMKPK 618
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 619 HLLSGKRKAGKKDRR 633
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 154 bits (374), Expect = 3e-37
Identities = 102/255 (40%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 386 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 445
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 446 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 504
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 505 GPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 560
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M A KK ++G KGEADR + PK
Sbjct: 561 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPK 619
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 620 HLLSGKRKAGKKDRR 634
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 154 bits (374), Expect = 3e-37
Identities = 102/255 (40%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 384 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 443
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 444 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 502
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 503 GPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 558
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M A KK ++G KGEADR + PK
Sbjct: 559 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPK 617
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 618 HLLSGKRKAGKKDRR 632
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 154 bits (374), Expect = 3e-37
Identities = 102/255 (40%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 386 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 445
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 446 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 504
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 505 GPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 560
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M A KK ++G KGEADR + PK
Sbjct: 561 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPK 619
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 620 HLLSGKRKAGKKDRR 634
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens cDNA
FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 154 bits (374), Expect = 3e-37
Identities = 102/255 (40%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 386 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 445
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 446 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 504
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 505 GPRMPRT--AKKVQRTV--LEKEMHSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 560
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M A KK ++G KGEADR + PK
Sbjct: 561 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPK 619
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 620 HLLSGKRKAGKKDRR 634
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 154 bits (374), Expect = 3e-37
Identities = 102/255 (40%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Frame = -3
Query: 728 KPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPD 549
K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 386 KRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPA 445
Query: 548 IFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQST 369
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 446 IMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQ 504
Query: 368 KPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXX------- 210
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 505 GPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP 560
Query: 209 -XXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
S P + D M K K M A KK ++G KGEADR + PK
Sbjct: 561 PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPK 619
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 620 HLLSGKRKAGKKDRR 634
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 153 bits (371), Expect = 6e-37
Identities = 98/255 (38%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Frame = -3
Query: 731 EKPAEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDP 552
+K E E ++K ERD+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP
Sbjct: 385 KKRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDP 444
Query: 551 DIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQS 372
I A G Y + D+ + EIR+LA+QIR KK + ES+ K +
Sbjct: 445 AIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNT 503
Query: 371 TKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXX---------- 222
P MPRT AK QR+ L K+M LGVDM + DAH+
Sbjct: 504 QGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSA 559
Query: 221 --XXXXXXXXXXREPSNQPVADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPK 48
R P + + VK + KK ++G KGEADR + PK
Sbjct: 560 PPSSVARSGSCSRTPRDVSGLRDVKMVKNAKTMMKNAQKKMNRLGKKGEADRHVFDMKPK 619
Query: 47 HLFAGKRGVGKTDRR 3
HL +GKR GK DRR
Sbjct: 620 HLLSGKRKAGKKDRR 634
>AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding protein
protein.
Length = 562
Score = 81.0 bits (191), Expect(2) = 8e-21
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = -3
Query: 704 KRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDI 546
++K ERD+E+E GDDY+LDL+K + + E+YD IPEIWEGHN+ADYIDP I
Sbjct: 433 RKKRERDLELEMGDDYILDLQKYWDLMNSSEKYDKIPEIWEGHNVADYIDPAI 485
Score = 39.5 bits (88), Expect(2) = 8e-21
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -3
Query: 434 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 255
A+QIR KK + +S+ K + P MPRT AK QR+ L +M LGVDM + +AH
Sbjct: 488 AKQIREKKKLKILQSK-EKNTQGPRMPRT--AKKVQRAD--LENEMRSLGVDMDDKDNAH 542
Query: 254 F 252
+
Sbjct: 543 Y 543
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.80
Identities = 46/183 (25%), Positives = 58/183 (31%), Gaps = 19/183 (10%)
Frame = -2
Query: 495 RHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
RH R Q DRAG D +G TQ Q S +A AGD Q A+
Sbjct: 216 RHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGDRHGSHHQQSAD 275
Query: 324 VHLQAQEGHGETW-----RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRP 160
+ GHG+ GH G AG+ Q +
Sbjct: 276 SSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQES 335
Query: 159 HHARESKEDGARG--------HRQEDQE---DGPQGRGGPVHRHQDAEASVRWKTWGRQD 13
R + G G H Q + GP RG RH+ A+ S R QD
Sbjct: 336 ARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHS--ASQD 393
Query: 12 GPE 4
G +
Sbjct: 394 GQD 396
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.9 bits (69), Expect = 2.4
Identities = 45/183 (24%), Positives = 58/183 (31%), Gaps = 19/183 (10%)
Frame = -2
Query: 495 RHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
RH R Q DRAG D +G TQ Q S +A AG+ Q A+
Sbjct: 2604 RHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSAD 2663
Query: 324 VHLQAQEGHGETW-----RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRP 160
+ GHG+ GH G AG+ Q +
Sbjct: 2664 SSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQES 2723
Query: 159 HHARESKEDGARG--------HRQEDQE---DGPQGRGGPVHRHQDAEASVRWKTWGRQD 13
R + G G H Q + GP RG RH+ A+ S R QD
Sbjct: 2724 ARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHS--ASQD 2781
Query: 12 GPE 4
G +
Sbjct: 2782 GQD 2784
Score = 31.1 bits (67), Expect = 4.3
Identities = 33/143 (23%), Positives = 42/143 (29%)
Frame = -2
Query: 471 RAGRHREGDQGTGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQEGHGE 292
R G H E + + QEG R PG + H S D++ GH
Sbjct: 1141 RQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQSVDRS--------GHSG 1192
Query: 291 TWRGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRPHHARESKEDGARGHRQ 112
+ H +G G HH S D +R H Q
Sbjct: 1193 SHHSHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAASWADSSR-HSQ 1251
Query: 111 EDQEDGPQGRGGPVHRHQDAEAS 43
QE Q G RHQ + S
Sbjct: 1252 VGQE---QSSGSRTSRHQGSSVS 1271
Score = 31.1 bits (67), Expect = 4.3
Identities = 42/172 (24%), Positives = 54/172 (31%), Gaps = 19/172 (11%)
Frame = -2
Query: 495 RHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
RH R Q DRAG D +G TQ Q S +A AG+ Q A+
Sbjct: 2928 RHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSAD 2987
Query: 324 VHLQAQEGHGETW-----RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRP 160
+ GHG+ GH G AG+ Q +
Sbjct: 2988 SSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQES 3047
Query: 159 HHARESKEDGARG--------HRQEDQE---DGPQGRGGPVHRHQDAEASVR 37
R + G G H Q + GP RG RH+ A+ S R
Sbjct: 3048 ARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSR 3099
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 31.9 bits (69), Expect = 2.4
Identities = 45/183 (24%), Positives = 58/183 (31%), Gaps = 19/183 (10%)
Frame = -2
Query: 495 RHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
RH R Q DRAG D +G TQ Q S +A AG+ Q A+
Sbjct: 120 RHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSAD 179
Query: 324 VHLQAQEGHGETW-----RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRP 160
+ GHG+ GH G AG+ Q +
Sbjct: 180 SSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSEDSDTQSVSAHGQAGSHQQSHQES 239
Query: 159 HHARESKEDGARG--------HRQEDQE---DGPQGRGGPVHRHQDAEASVRWKTWGRQD 13
R + G G H Q + GP RG RH+ A+ S R QD
Sbjct: 240 ARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHS--ASQD 297
Query: 12 GPE 4
G +
Sbjct: 298 GQD 300
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = -2
Query: 495 RHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
RH R Q DRAG D +G TQ Q S +A AGD Q A+
Sbjct: 444 RHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGDRHGSHHQQSAD 503
Query: 324 VHLQAQEGHGE 292
+ GHG+
Sbjct: 504 SSRHSGIGHGQ 514
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 30.7 bits (66), Expect = 5.6
Identities = 41/163 (25%), Positives = 54/163 (33%), Gaps = 9/163 (5%)
Frame = -2
Query: 477 QDRAGRHREGDQG--TGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQE 304
+DRAG D +G TQ Q S +A AGD Q A+ +
Sbjct: 280 EDRAGHGHSADSSXQSGTRHTQTSSRRQAASSQEQARSRAGDRHGSGHQQSADSSRHSGI 339
Query: 303 GHGETWRGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRPHHARESKEDGAR 124
G G+ V D + AG HH ES ++ R
Sbjct: 340 GRGQASTA-VRDSGHRGSRGSQASDNEGHSEDSDTQSVAGQRQAGS--HH--ESHQESTR 394
Query: 123 GHRQEDQEDGPQGRGG----PVHRHQDAEASVRW---KTWGRQ 16
G +E GR G V H+ +E+S W T GRQ
Sbjct: 395 GQSRE-----TSGRSGSFLYQVSTHEQSESSHGWSGTSTRGRQ 432
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 30.7 bits (66), Expect = 5.6
Identities = 35/159 (22%), Positives = 52/159 (32%), Gaps = 14/159 (8%)
Frame = -2
Query: 480 AQDRAGRHREGDQGTGPADT------------QQEGHSQGRVSPGEAVHEAG--DAAHLA 343
AQ +AG H++ Q + + Q H Q + G++V G +H
Sbjct: 93 AQGQAGPHQQSHQESARGQSGESSGRSGSFLYQVSTHEQSESTHGQSVPSTGGRQGSHHD 152
Query: 342 SQDQAEVHLQAQEGHGETWRGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGR 163
+ H +QEG +T RGH G T Q
Sbjct: 153 QAQDSSRHSASQEGQ-DTIRGHPGPSRGGRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDA 211
Query: 162 PHHARESKEDGARGHRQEDQEDGPQGRGGPVHRHQDAEA 46
S+ + H QE DG + G RHQ+A +
Sbjct: 212 SRGQSGSRSASRQTHDQEQSGDGSRHSGS---RHQEASS 247
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 171 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPV 70
G H RE +E G +G + E DGP GR GP+
Sbjct: 1313 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1345
>AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase
complex, subunit C delta3+5 alternative splicing varian
protein.
Length = 116
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 500 PRAVPRPSPTLPVYQRCPGRY 562
PR P SP +PV+ CPG Y
Sbjct: 50 PRKRPEDSPAIPVWSGCPGSY 70
>AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase
complex, subunit C delta5 alternative splicing variant
protein.
Length = 150
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 500 PRAVPRPSPTLPVYQRCPGRY 562
PR P SP +PV+ CPG Y
Sbjct: 84 PRKRPEDSPAIPVWSGCPGSY 104
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 138 EDGARGHRQEDQEDGPQGRGGP 73
E G G R ED +GP+GRGGP
Sbjct: 784 EIGPPGPRGEDGPEGPKGRGGP 805
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 171 GGRPHHARESKEDGARGHRQEDQEDGPQGRGGPV 70
G H RE +E G +G + E DGP GR GP+
Sbjct: 1226 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1258
>BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein.
Length = 1797
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 272 ET 267
ET
Sbjct: 185 ET 186
>AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepine
receptor interacting protein protein.
Length = 1857
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 272 ET 267
ET
Sbjct: 185 ET 186
>AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein.
Length = 1810
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 449 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 273
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 138 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 197
Query: 272 ET 267
ET
Sbjct: 198 ET 199
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1169 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1200
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1276 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1307
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
GR E+ G RG R E E G QGR GP
Sbjct: 2014 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 2045
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
GR E+ G RG R E E G QGR GP
Sbjct: 2046 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 2077
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 547 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 578
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1162 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1193
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1276 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1307
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G P +DGA+G R ED E G G GP
Sbjct: 1190 GPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
>AF286472-1|AAG00551.1| 567|Homo sapiens retinitis pigmentosa
GTPase regulator protein.
Length = 567
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 453 EGDQGTGPADTQQEGHSQGRVSPGEAV-HEAGDAAHLASQDQAEVHLQAQEGHGE 292
EG++ G + ++EG +G GE E G+ + + + + +EG GE
Sbjct: 292 EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE 346
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 453 EGDQGTGPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQEGHGE 292
EG++ G + ++EG +G GE E G+ + + E +EG GE
Sbjct: 371 EGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEE---GEEEGEGE 421
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 168 GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
GR E+ G RG R E E G QGR GP
Sbjct: 685 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 716
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,256,366
Number of Sequences: 237096
Number of extensions: 1630763
Number of successful extensions: 7615
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 6244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7551
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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