Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p10r
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029268-1|ABK30905.1|  461|Drosophila melanogaster IP07471p pro...   225   4e-59
AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD2383...   225   4e-59
AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA ...   225   4e-59
L31626-1|AAA21800.1|  416|Drosophila melanogaster homeodomain-co...    29   4.9  
BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p pro...    29   4.9  
AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA...    29   4.9  
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro...    29   6.5  
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P...    29   6.5  

>BT029268-1|ABK30905.1|  461|Drosophila melanogaster IP07471p
           protein.
          Length = 461

 Score =  225 bits (551), Expect = 4e-59
 Identities = 124/263 (47%), Positives = 157/263 (59%), Gaps = 23/263 (8%)
 Frame = -3

Query: 722 AEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIF 543
           A+K  RKRKLE++IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 199 ADKAERKRKLEKEIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIF 258

Query: 542 XXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKP 363
                           G+Y  P + +D+T++EIRE+A+QIR K+  L+DE RL  +  KP
Sbjct: 259 DKLEELEREEGLREESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKP 318

Query: 362 VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREP 183
           V+PR  + K + RS  KL   ME LGVDMS + +A+FT                    +P
Sbjct: 319 VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQP 378

Query: 182 SNQPVADPIMR---VKVKR--------MAHAAIAKKTKKM------------GLKGEADR 72
                +  ++R     +KR        + + AI KK + M            GLKGEADR
Sbjct: 379 LLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADR 438

Query: 71  FIGTKMPKHLFAGKRGVGKTDRR 3
           FIGTKMPKHLF+GKRG GKTDRR
Sbjct: 439 FIGTKMPKHLFSGKRGNGKTDRR 461


>AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD23830
            protein.
          Length = 652

 Score =  225 bits (551), Expect = 4e-59
 Identities = 124/263 (47%), Positives = 157/263 (59%), Gaps = 23/263 (8%)
 Frame = -3

Query: 722  AEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIF 543
            A+K  RKRKLE++IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 390  ADKAERKRKLEKEIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIF 449

Query: 542  XXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKP 363
                            G+Y  P + +D+T++EIRE+A+QIR K+  L+DE RL  +  KP
Sbjct: 450  DKLEELEREEGLREESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKP 509

Query: 362  VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREP 183
            V+PR  + K + RS  KL   ME LGVDMS + +A+FT                    +P
Sbjct: 510  VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQP 569

Query: 182  SNQPVADPIMR---VKVKR--------MAHAAIAKKTKKM------------GLKGEADR 72
                 +  ++R     +KR        + + AI KK + M            GLKGEADR
Sbjct: 570  LLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADR 629

Query: 71   FIGTKMPKHLFAGKRGVGKTDRR 3
            FIGTKMPKHLF+GKRG GKTDRR
Sbjct: 630  FIGTKMPKHLFSGKRGNGKTDRR 652


>AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA
            protein.
          Length = 652

 Score =  225 bits (551), Expect = 4e-59
 Identities = 124/263 (47%), Positives = 157/263 (59%), Gaps = 23/263 (8%)
 Frame = -3

Query: 722  AEKENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIF 543
            A+K  RKRKLE++IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 390  ADKAERKRKLEKEIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIF 449

Query: 542  XXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKP 363
                            G+Y  P + +D+T++EIRE+A+QIR K+  L+DE RL  +  KP
Sbjct: 450  DKLEELEREEGLREESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKP 509

Query: 362  VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREP 183
            V+PR  + K + RS  KL   ME LGVDMS + +A+FT                    +P
Sbjct: 510  VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQP 569

Query: 182  SNQPVADPIMR---VKVKR--------MAHAAIAKKTKKM------------GLKGEADR 72
                 +  ++R     +KR        + + AI KK + M            GLKGEADR
Sbjct: 570  LLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADR 629

Query: 71   FIGTKMPKHLFAGKRGVGKTDRR 3
            FIGTKMPKHLF+GKRG GKTDRR
Sbjct: 630  FIGTKMPKHLFSGKRGNGKTDRR 652


>L31626-1|AAA21800.1|  416|Drosophila melanogaster
           homeodomain-containing protein protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 498 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHSQGRVSPGEA 376
           W   RR +DRA  H++G       D+  +   +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305


>BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p
           protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 498 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHSQGRVSPGEA 376
           W   RR +DRA  H++G       D+  +   +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305


>AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA
           protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 498 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHSQGRVSPGEA 376
           W   RR +DRA  H++G       D+  +   +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305


>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
           protein.
          Length = 1398

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 435 GPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
           GP D + EGH  G  S  +A  +A  A  L ++ Q +
Sbjct: 28  GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64


>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
           isoform A protein.
          Length = 1398

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 435 GPADTQQEGHSQGRVSPGEAVHEAGDAAHLASQDQAE 325
           GP D + EGH  G  S  +A  +A  A  L ++ Q +
Sbjct: 28  GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,280,807
Number of Sequences: 53049
Number of extensions: 496877
Number of successful extensions: 2758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2751
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)