Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p10r
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 134 8e-32
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 111 6e-25
AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical... 37 0.013
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 31 1.1
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 4.5
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 29 4.5
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 28 5.9
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 28 5.9
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 28 7.8
U97006-3|AAC47966.1| 470|Caenorhabditis elegans Hypothetical pr... 28 7.8
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 28 7.8
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 134 bits (323), Expect = 8e-32
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Frame = -3
Query: 716 KENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXX 537
++ R+LER+IE+E DDY+LDLKK+Y DE+YD++PEIWEGHN+AD++DP+I
Sbjct: 439 RDENTRRLEREIELEMQDDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSK 498
Query: 536 XXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVM 357
G Y + D+ +E +LA QIR K+ +L + + K+ +
Sbjct: 499 LENLLREEELLEQAGEYESDLDSDDEETKEKLKLALQIREKEKLLTLDHAVNKRIAGRIG 558
Query: 356 PRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREPSN 177
R ++ + RS S+L ++ +LGVD+ +
Sbjct: 559 SRIHGSRKRDRSMSRLENELGELGVDVDTKKMKNLQGQCAKPQLGKKMKVGRSRSLSAVR 618
Query: 176 QPVADPIMRVKVKRMAHAAIAKKTKKMGL-----KGEADRFIGTKMPKHLFAGKRGVGKT 12
D + ++ AH + GL KGEADR + PKHLF GKRG GKT
Sbjct: 619 PAPRDELAFPDEEKRAHVDKLRTKAMRGLRREAKKGEADRHVYDLKPKHLFCGKRGNGKT 678
Query: 11 DRR 3
D R
Sbjct: 679 DWR 681
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 111 bits (266), Expect = 6e-25
Identities = 54/147 (36%), Positives = 86/147 (58%)
Frame = -3
Query: 716 KENRKRKLERDIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXX 537
++ R+LER+IE+E DDY+LDLKK+Y DE+YD++PEIWEGHN+AD++DP+I
Sbjct: 439 RDENTRRLEREIELEMQDDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSK 498
Query: 536 XXXXXXXXXXXXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVM 357
G Y + D+ +E +LA QIR K+ +L + + K+ +
Sbjct: 499 LENLLREEELLEQAGEYESDLDSDDEETKEKLKLALQIREKEKLLTLDHAVNKRIAGRIG 558
Query: 356 PRTSRAKTKQRSTSKLRKDMEKLGVDM 276
R ++ + RS S+L ++ +LGVD+
Sbjct: 559 SRIHGSRKRDRSMSRLENELGELGVDV 585
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -3
Query: 149 VKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 3
V K+M + ++G KGEADR + PKHLF GKRG GKTD R
Sbjct: 585 VDTKKMKNLQGQCAKPQLGKKGEADRHVYDLKPKHLFCGKRGNGKTDWR 633
>AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical
protein T07A9.9c protein.
Length = 53
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = -3
Query: 167 ADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 3
AD + R K+ + AA+ + K LK + F K PKHLF GKRG GKTD R
Sbjct: 4 ADSLYRCKM--LKRAALGRMVKL--LKRQKSSFEYLK-PKHLFCGKRGNGKTDWR 53
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -3
Query: 446 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 279
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -3
Query: 446 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 279
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -3
Query: 446 IRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVD 279
+ + RQ +L+ +S + + T+ + + R+K + T LRKDM++L D
Sbjct: 749 VADAKRQNDELSELLESKSTTLVEKTRSLEEQEERSKKLRAETELLRKDMQELETD 804
>U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical
protein C23G10.8 protein.
Length = 937
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +1
Query: 4 LRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVFL-----AMAACAILFTFTRMM 159
L S PT F + F IL P N +A + P+FL+ AMA C + T RM+
Sbjct: 637 LGSNSPTENFMTSEYFDILQPWNYTALWINPLFLLAKDGNQEAMAQCTRIKTAPRMV 693
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -2
Query: 189 GTLQPAG--GRPHHARESKEDGARGHRQEDQEDGPQGRGGP 73
G PAG G+P ++ +DG G D + GP G GP
Sbjct: 159 GPAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGP 199
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 189 GTLQPAG--GRPHHARESKEDGARGHRQEDQEDGPQGRGGPVH 67
GT P+G G+P A + GA+G + D DGP G G +
Sbjct: 163 GTCGPSGDDGQPGPAGPLGDKGAQGPKGFDGADGPDGMPGTAY 205
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 380 KQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 264
+ +T+P +PRT RA TK +T + R+ + D + G
Sbjct: 332 QSATEPPIPRTKRAYTKNPNTIRKRRMKKNQSDDEEDDG 370
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 380 KQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETG 264
+ +T+P +PRT RA TK +T + R+ + D + G
Sbjct: 373 QSATEPPIPRTKRAYTKNPNTIRKRRMKKNQSDDEEDDG 411
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 177 PAG--GRPHHARESKEDGARGHRQEDQEDGPQGRGG 76
PAG G P A DGA G + +DGPQG G
Sbjct: 230 PAGPAGAPGPAGAPGADGAAGAPGQPGQDGPQGPAG 265
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -2
Query: 135 DGARGHRQEDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDGPE 4
DG GH E GPQG+ GP R + A R K GR GP+
Sbjct: 204 DGNPGHPGEMGAPGPQGKQGPDGRQGEKGADGR-KPIGR-PGPK 245
>U97006-3|AAC47966.1| 470|Caenorhabditis elegans Hypothetical
protein C13F10.6 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 641 KNYTEIPEDERYDVIPEIWEGHNIADYI-DPDIF 543
+N +++PEDER +++ G+N D I +PD+F
Sbjct: 66 RNCSDVPEDERSEIV-----GYNYKDTIQNPDVF 94
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 647 LKKNYTEIPEDERYDVIPEIWEG-HNIADYI 558
LK+NY ++ E+E++D E+ + H I DY+
Sbjct: 49 LKQNYEKLVEEEQFDPRAELKKSKHRIEDYL 79
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 476 KIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKD 300
K+E RE + L + R +K LK+E+R K+ K +M K + S ++++++
Sbjct: 314 KLEKQAMKREKQRLKEEEREEKLRLKEENREKKRREKARIMELKRLEKVYRTSNARIQEN 373
Query: 299 MEK 291
EK
Sbjct: 374 HEK 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,502
Number of Sequences: 27780
Number of extensions: 232283
Number of successful extensions: 1374
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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