BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11p09r (741 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g49960.1 68418.m06186 expressed protein ; expression supporte... 32 0.35 At2g28870.1 68415.m03509 expressed protein 29 4.3 At1g53840.1 68414.m06128 pectinesterase family protein contains ... 29 4.3 At5g52400.1 68418.m06501 cytochrome P450 family protein similar ... 28 5.7 At3g22170.1 68416.m02798 far-red impaired responsive protein, pu... 27 9.9 >At5g49960.1 68418.m06186 expressed protein ; expression supported by MPSS Length = 824 Score = 32.3 bits (70), Expect = 0.35 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -3 Query: 253 CLDDACSHSYAYVFYAESIRQAVDGGNEFVGTACNSYEEARNLRCSGPRDAIFGGIEVKE 74 CL CS S+ YV + S ++ N + T CNS + + + R +F + + Sbjct: 86 CLKFICSCSFTYVMFLRSKVSRLEAENIILLTRCNSSSDNNEMEETNSRAVVFFSVIITF 145 Query: 73 V-EMGIYIFLTNI 38 V +Y++L ++ Sbjct: 146 VLPFLLYMYLDDL 158 >At2g28870.1 68415.m03509 expressed protein Length = 156 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +3 Query: 444 EFLAAIPAMCPPRPSPTMRISSES*LKV 527 + L+A+P +CPP P R+ S S LKV Sbjct: 93 QILSAMPRICPPAPRKPKRVPSRS-LKV 119 >At1g53840.1 68414.m06128 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase Length = 586 Score = 28.7 bits (61), Expect = 4.3 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = -1 Query: 315 VMTILWEISTFIPPAVAVKADAWTMPAPILTPMFSTPNLSGKQ*MEVMSSSELLAIATKK 136 V+ ++ I + V K + P+P P TP+ S K V E + K Sbjct: 36 VVVLIAVIIAAVVATVVHKNKNESTPSP---PPELTPSTSLKAICSVTRFPESCISSISK 92 Query: 135 LATSDALDPETPFSVELKL 79 L +S+ DPET F + LK+ Sbjct: 93 LPSSNTTDPETLFKLSLKV 111 >At5g52400.1 68418.m06501 cytochrome P450 family protein similar to Cytochrome P450 72A1 (SP:Q05047) (cytochrome P450 lxxii hydroxylase) (ge10h) [Catharanthus roseus] Length = 519 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 270 VAVKADAWTMPAPILTPMFSTPNLSGKQ*MEVMSSSELL 154 V V+ D WT I+TP F+ NL M V S S +L Sbjct: 154 VMVEGDDWTRHRHIITPAFAPLNLKVMTNMMVESVSNML 192 >At3g22170.1 68416.m02798 far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family Length = 839 Score = 27.5 bits (58), Expect = 9.9 Identities = 22/73 (30%), Positives = 29/73 (39%) Frame = -3 Query: 412 DPSLHGWTHNPEILNPDDANIVEVLHTTAGLIGYDYPLGDLDFYPSGGSGQSGCLDDACS 233 D L HN E ++ V V T +G P G+L Y G + + + S Sbjct: 19 DRGLDNVLHNEEDMDIGKIEDVSVEVNTDDSVGMGVPTGELVEYTEGMNLEPLNGMEFES 78 Query: 232 HSYAYVFYAESIR 194 H AY FY E R Sbjct: 79 HGEAYSFYQEYSR 91 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,257,555 Number of Sequences: 28952 Number of extensions: 312710 Number of successful extensions: 869 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 869 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1633819784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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