Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p09f
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689...    29   2.4  
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631...    29   3.2  
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791...    29   3.2  
10_06_0124 + 11013346-11013474,11013879-11013939,11014751-110148...    27   7.3  
12_01_1052 + 10821964-10822064,10822434-10822607,10823086-108233...    27   9.7  
09_04_0589 + 18797422-18797868                                         27   9.7  
02_05_0977 - 33239887-33240566,33241010-33241985                       27   9.7  
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207...    27   9.7  

>10_08_0607 +
           19168164-19168358,19168594-19168716,19168791-19168946,
           19169129-19169314,19169467-19169583,19169721-19169774,
           19169854-19169925,19170430-19170535,19170658-19170754,
           19171090-19171184,19172318-19172420,19172699-19172886,
           19174928-19175183,19177187-19177325
          Length = 628

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 60  SVQFQFGRTGCCISPLSSGKPSGQ*TVVAVCQLYYDFFV 176
           ++ FQ+G      SPL + K +G+  V    Q   DFF+
Sbjct: 275 AIGFQYGSPDAVCSPLINAKKTGRSLVETYAQYVQDFFI 313


>05_03_0281 +
           11560402-11560569,11561373-11561579,11562966-11563174,
           11563261-11563309,11563611-11563673,11563799-11565472
          Length = 789

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = -1

Query: 246 SVEVSSDSFTVIVYREDGAASEGERRSHNRVDRQQQRFTDLRASPMKEVKYNIPFSQIET 67
           S++ +SD  T I  +E G   +G+ +SH+         T+  A+P K++K ++  S ++T
Sbjct: 601 SLQENSDGLT-ITSKEGGRKKKGKGKSHD--------VTETSAAPAKDMKDSLADSFLDT 651

Query: 66  VR 61
           VR
Sbjct: 652 VR 653


>04_04_0116 +
           22877296-22877482,22877578-22877627,22879057-22879180,
           22879266-22879373,22879462-22880084
          Length = 363

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 318 FRSRTPVDGDYVYIFSGEVSGYDESVEVSSDSFTVIVYREDGAA 187
           FR  TP+      +  G ++GYD +  +  +    +    DGA+
Sbjct: 245 FRHPTPIGARIRQVMGGRIAGYDINYVIDGEGMRKVAAARDGAS 288


>10_06_0124 +
           11013346-11013474,11013879-11013939,11014751-11014838,
           11017619-11017806,11017849-11018112,11018188-11018262,
           11018263-11019698
          Length = 746

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -1

Query: 522 VERWVQSNNVRNRLV*ISSCDTSDVSTETKSDNANKLGIVAEGCSQDIDEFS 367
           V+ W +S   RN+ + +SS     +      ++A  L +    CS+DI + S
Sbjct: 539 VKIWCKSATKRNKSISLSSAIQKFIENGNDPNDARSLSVDFSECSEDILQIS 590


>12_01_1052 +
           10821964-10822064,10822434-10822607,10823086-10823346,
           10829833-10831798,10832114-10832515
          Length = 967

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 115 GSPQVSEPLLLSVNSIMTSS 174
           G PQ+S PLL SV+ + TSS
Sbjct: 34  GRPQLSAPLLASVDELPTSS 53


>09_04_0589 + 18797422-18797868
          Length = 148

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 309 RTPVDGDYVYIFSGEVSGYDESVEVSSDSFTVIVYREDGAASEGERRSHNRV 154
           R P+ G  +   + + S    S+ V + S T      DGAA+ G+RR  +RV
Sbjct: 59  RRPLSGHDMAALAVKASAALSSIGVPTSSATRRKDDRDGAAASGKRRRTSRV 110


>02_05_0977 - 33239887-33240566,33241010-33241985
          Length = 551

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +1

Query: 172 SFSLARRTIFTIHNHGETVAGNFNAFVIP-----AHLAAEDVNVIAV 297
           + +LA        NHG+T A   N  V+P     A  AA  VNV A+
Sbjct: 2   ALALATPVAAVAANHGDTAAAKDNVAVVPRIAASAAAAASSVNVTAI 48


>01_01_0255 +
           2079112-2079196,2079334-2079514,2079712-2079853,
           2079934-2080003,2080140-2080303
          Length = 213

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 23  WLSVRCYCALLLQRTVSIWENGMLYF 100
           +LS+ CY A+L    V IW N   +F
Sbjct: 62  FLSLACYLAMLGMLVVFIWANASAFF 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,675,705
Number of Sequences: 37544
Number of extensions: 263064
Number of successful extensions: 801
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)