BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11p09f
(543 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 29 0.099
EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein. 23 4.9
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 4.9
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 23 4.9
DQ518576-1|ABF66618.1| 276|Anopheles gambiae putative cytoplasm... 23 8.6
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 23 8.6
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 23 8.6
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 29.1 bits (62), Expect = 0.099
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 390 YNLQLRFRAYSHCRTWSRWTHRWY 461
Y+L+ RAY H T+ RW W+
Sbjct: 1000 YDLEPELRAYLHTNTYVRWGDPWF 1023
>EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein.
Length = 399
Score = 23.4 bits (48), Expect = 4.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -1
Query: 429 DNANKLGIVAEGCSQDIDEFSN*STALTSVGQTLGV*FRSRTPVDGDYVYI 277
D+ + LG + + +DE + A+TSVG V ++ VD +++I
Sbjct: 331 DHKSMLGALKQSTFVQVDENGTEAAAVTSVGTKFRV-RNTQFRVDRPFIFI 380
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 23.4 bits (48), Expect = 4.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 198 DGAASEGERRSHNR 157
DGA SEG R SH++
Sbjct: 1028 DGAPSEGRRLSHSK 1041
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 23.4 bits (48), Expect = 4.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 469 RNSNQPIPHIIALDPSLH 522
RNS +P+ H++ L+ L+
Sbjct: 175 RNSTEPVEHVLHLEEELY 192
>DQ518576-1|ABF66618.1| 276|Anopheles gambiae putative cytoplasmic
carbonic anhydrase protein.
Length = 276
Score = 22.6 bits (46), Expect = 8.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 127 PEGFPDERGEIQHPV 83
PE FP RG+ Q PV
Sbjct: 17 PEMFPQARGQRQSPV 31
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 22.6 bits (46), Expect = 8.6
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 264 VSGYDESVEVSSDSFTVIVYREDGAASEGERRSHNRVD 151
VSGYD S +SS V E+ AS SH D
Sbjct: 563 VSGYDSSTSISS----VCSGPEEDNASHSSASSHGSSD 596
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 22.6 bits (46), Expect = 8.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 232 GNFNAFVIPAHLAAE 276
G FN FVIPA +A +
Sbjct: 75 GGFNMFVIPAVMAID 89
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,382
Number of Sequences: 2352
Number of extensions: 10109
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -