Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p01r
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 436 LDEDGNGLVXVDLP-IEAQPEDLEKAQLVDLXVENVAEPEDLSP 308
           L+ +G+ +  V +  ++  P++     LVD+  +   E EDL+P
Sbjct: 428 LNNEGSLVYNVQIENLKTTPDNTTFITLVDVSTKRRTELEDLTP 471


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -1

Query: 631 MLQWRTPMSRLIXSAS*TTSMLQLRTPIXXVAPXNIV 521
           +  +R P  +++ S S T+S  + R+P     P  ++
Sbjct: 271 LYNFRVPQHQVLQSPSSTSSSPEPRSPESLFKPVTVI 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,228
Number of Sequences: 336
Number of extensions: 1889
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)