Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11p01r
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731...    30   1.6  
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466...    29   3.6  
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105...    28   8.4  
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266...    28   8.4  

>02_05_1303 +
           35572403-35572624,35572744-35572860,35572987-35573112,
           35573217-35573279,35573837-35573944,35574587-35574664,
           35574772-35574864,35575206-35575292,35575429-35575530,
           35575617-35575736,35575839-35575901,35575974-35576119,
           35576203-35576296,35576399-35576457,35576568-35576607,
           35576694-35576785,35576877-35576946,35578172-35578333,
           35578477-35578703,35578863-35579070,35579173-35579258,
           35579450-35579541,35579674-35579870
          Length = 883

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/83 (26%), Positives = 36/83 (43%)
 Frame = -1

Query: 496 EEIENDSEVGSISWVEYPAELDEDGNGLVXVDLPIEAQPEDLEKAQLVDLXVENVAEPED 317
           EE E + E       E P E ++  +G+  VD  I + P  +E   ++DL      EPE 
Sbjct: 407 EEEEEEEEEEEEEEEEEPMEDEDMEDGMQSVDT-ISSTPTGVETPDVIDLRKLQRKEPEK 465

Query: 316 LSPVQVVXPIVENSQSEXPGKRY 248
            +  Q+   + +  +   PG  Y
Sbjct: 466 QTEKQLYQILEQKEERIAPGAIY 488


>01_07_0374 +
           43144861-43144998,43145695-43145794,43146499-43146651,
           43147383-43150081
          Length = 1029

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
 Frame = -1

Query: 511 VEKTXEEIENDSEVGSISWVEYPAELDEDGNGLVXVDLPIEAQPEDLEK---------AQ 359
           +EK  E  E D   GSIS  E    +DE  N +V ++L + +Q   +++         + 
Sbjct: 419 LEKIKEHFERD---GSISVAEITEHIDELVNKVVDLELMVSSQSSQIDRLCRENSELESC 475

Query: 358 LVDLXVENVAEPEDLS 311
           L  L  ENV++P+ ++
Sbjct: 476 LQSLEEENVSDPDKVN 491


>09_01_0073 -
           1057560-1058043,1058199-1058385,1058754-1059062,
           1059427-1060269,1061572-1062552,1063189-1063516
          Length = 1043

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
 Frame = -1

Query: 511 VEKTXEEIENDSEVGSISWVEYPAELDEDGNGLVXVDL-----PIEAQPEDLEKAQL-VD 350
           +EK  + +E+   +G I    +     E    ++ ++      PIEA P+D+E+ ++ ++
Sbjct: 594 IEKIVQRLEDIQIIGEIPMKYWEKNAIECKINIINLEYIIKTSPIEATPKDIEEFKMHIE 653

Query: 349 LXVENVAEPEDLSPVQVVXPIVENSQSEXPGK 254
             ++  A  E  SP +    IV N   E  GK
Sbjct: 654 ELLKLGAIRESRSPHRSAAFIVRNHAEEVRGK 685


>01_06_0645 +
           30826267-30826307,30826403-30826454,30826580-30826659,
           30826804-30826882,30826962-30827045,30827131-30827276,
           30827362-30827628,30827825-30827907,30828162-30828271,
           30828544-30829159,30829471-30829620,30829700-30829800
          Length = 602

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 358 LVDLXVENVAEPEDLSPVQVVXPIVENSQSEXPG 257
           L+DL + +  +  DLS V +V P+   S+ + PG
Sbjct: 512 LIDLNITSSQKKVDLSDVGIVGPLSGGSEDKGPG 545


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,936
Number of Sequences: 37544
Number of extensions: 180975
Number of successful extensions: 401
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)